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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type III alpha 1 chain
Summary
- Gene Symbol
-
- COL3A1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Aortic aneurysm
- Calcium
- Collagen
- Direct protein sequencing
- Disease variant
- Disulfide bond
- Ehlers-Danlos syndrome
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| P02461 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| cell-matrix adhesion | ||
| wound healing | ||
| endochondral bone morphogenesis | ||
| negative regulation of immune response | ||
| limb joint morphogenesis |
GO Hierarchy
biological process
metabolic process [inference]
cellular process [inference]
developmental process [inference]
response to stimulus [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of signaling [inference]
positive regulation of biological process [inference]
regulation of response to stimulus [inference]
regulation of cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| extracellular region | ||
| collagen type III trimer | ||
| extracellular space |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| SMAD binding | ||
| integrin binding | ||
| platelet-derived growth factor binding | ||
| extracellular matrix structural constituent |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen alpha
- Functional Category
-
- E: Amino acid transport and metabolism
- I: Lipid transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| Collagen triple helix repeat |
| Fibrillar collagen, C-terminal |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050827 | rheumatic heart disease | |
| DOID:0050851 | glomerulosclerosis | |
| DOID:13359 | Ehlers-Danlos syndrome | |
| DOID:13948 | bladder neck obstruction | |
| DOID:14756 | vascular type Ehlers-Danlos syndrome | |
| DOID:14757 | Ehlers-Danlos syndrome hypermobility type | |
| DOID:418 | systemic scleroderma | |
| DOID:5844 | myocardial infarction | |
| DOID:783 | end stage renal disease | |
| DOID:9352 | type 2 diabetes mellitus |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12825 | MGI:88453 | MOUSE27386 | ||
| 84032 | RGD:71029 | RATNO42333 | ||
| 398983 | Xenbase:XB-GENE-5864327 | |||
| 459815 | 9598_0:000c3c | PANTR29349 | ||
| 478835 | CANLF14044 | |||
| 510833 | BOVIN23912 | |||
| 574131 | MACMU06625 | |||
| 100009177 | RABIT11844 | |||
| 100028423 | MONDO21542 | |||
| 100101231 | SHEEP09336 |
