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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type IV alpha 1 chain
Summary
- Gene Symbol
-
- COL4A1
- Organism
- Homo sapiens (human)
Annotation
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| renal tubule morphogenesis | ||
| branching involved in blood vessel morphogenesis | ||
| brain development | ||
| collagen-activated tyrosine kinase receptor signaling pathway | ||
| neuromuscular junction development |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| basement membrane | ||
| extracellular region | ||
| collagen type IV trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| platelet-derived growth factor binding | ||
| extracellular matrix structural constituent | ||
| extracellular matrix structural constituent conferring tensile strength |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- G: Carbohydrate transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| C-type lectin fold |
| Collagen IV, non-collagenous domain superfamily |
| Collagen IV, non-collagenous |
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050560 | Walker-Warburg syndrome | |
| DOID:0060263 | porencephaly | |
| DOID:0090125 | brain small vessel disease 1 | |
| DOID:0111547 | retinal arterial tortuosity | |
| DOID:13223 | uterine fibroid | |
| DOID:423 | myopathy | |
| DOID:557 | kidney disease | |
| DOID:5844 | myocardial infarction | |
| DOID:6432 | pulmonary hypertension | |
| DOID:854 | collagen disease |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12826 | MGI:88454 | MOUSE59761 | ||
| 33726 | FB:FBgn0016075 | |||
| 33727 | FB:FBgn0000299 | |||
| 176314 | WB:WBGene00001263 | |||
| 181708 | WB:WBGene00002280 | |||
| 282191 | BOVIN04116 | |||
| 290905 | RGD:1307148 | RATNO11547 | ||
| 373764 | Xenbase:XB-GENE-6252694 | |||
| 403496 | CANLF08849 | |||
| 452659 | 9598_0:00397b | PANTR08074 |
