Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
collagen, type V, alpha 2
Summary
- Gene Symbol
-
- Col5a2
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- Calcium
- Collagen
- Disulfide bond
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| Q3U962 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| eye morphogenesis | ||
| negative regulation of endodermal cell differentiation | ||
| ossification | ||
| skin development | ||
| collagen fibril organization |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen trimer | ||
| extracellular space | ||
| collagen type V trimer | ||
| collagen-containing extracellular matrix | ||
| collagen type XI trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| SMAD binding | ||
| metal ion binding | ||
| extracellular matrix structural constituent conferring tensile strength |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- collagen alpha-2(V) chain
- Functional Category
-
- O: Posttranslational modification, protein turnover, chaperones
- Q: Secondary metabolites biosynthesis, transport and catabolism
- X: Mobilome: prophages, transposons
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| metal ion binding |
| InterPro |
|---|
| Collagen triple helix repeat |
| Fibrillar collagen, C-terminal |
| VWFC domain |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0080726 | Ehlers-Danlos syndrome classic type 2 | |
| DOID:13207 | proliferative diabetic retinopathy | |
| DOID:13359 | Ehlers-Danlos syndrome | |
| DOID:14720 | Ehlers-Danlos syndrome classic type 1 | |
| DOID:850 | lung disease |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 1290 | HGNC:2210 | HUMAN65962 | ||
| 85250 | 10116_1:0031eb | RGD:70921 | RATNO42341 | |
| 459817 | PANTR29350 | |||
| 478836 | CANLF14045 | |||
| 564821 | ZFIN:ZDB-GENE-030616-13 | DANRE45042 | ||
| 712935 | MACMU06868 | |||
| 100006366 | ZFIN:ZDB-GENE-110406-2 | |||
| 100054421 | HORSE13462 | |||
| 100084038 | ORNAN25471 | |||
| 100223323 | TAEGU28524 |
