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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type IV alpha 4 chain
Summary
- Gene Symbol
-
- COL4A4
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alport syndrome
- Basement membrane
- Collagen
- Deafness
- Disease variant
- Disulfide bond
- Glycoprotein
- Hydroxylation
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| P53420 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| glomerular basement membrane development |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| basement membrane | ||
| extracellular region | ||
| collagen type IV trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular matrix structural constituent | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| molecular adaptor activity |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- G: Carbohydrate transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| C-type lectin fold |
| Collagen IV, non-collagenous domain superfamily |
| Collagen IV, non-collagenous |
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110033 | autosomal recessive Alport syndrome | |
| DOID:0111365 | benign familial hematuria | |
| DOID:10983 | Alport syndrome | |
| DOID:423 | myopathy | |
| DOID:783 | end stage renal disease | |
| DOID:854 | collagen disease |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12829 | MGI:104687 | MOUSE27546 | ||
| 33727 | FB:FBgn0000299 | |||
| 301562 | RGD:1305355 | |||
| 403841 | CANLF10044 | |||
| 459986 | 9598_0:000d93 | PANTR29916 | ||
| 554270 | ZFIN:ZDB-GENE-101001-1 | |||
| 708287 | MACMU06117 | |||
| 100062160 | HORSE36087 | |||
| 100073948 | ORNAN24860 | |||
| 100227313 | TAEGU30403 |
