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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type IV alpha 5 chain
Summary
- Gene Symbol
-
- COL4A5
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alport syndrome
- Alternative splicing
- Basement membrane
- Chromosomal rearrangement
- Collagen
- Deafness
- Disease variant
- Disulfide bond
- Glycoprotein
- Hydroxylation
- Proteomics identification
- Reference proteome
- Repeat
- Signal
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-activated tyrosine kinase receptor signaling pathway | ||
| neuromuscular junction development | ||
| extracellular matrix organization |
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| neuromuscular junction | ||
| basement membrane | ||
| extracellular region |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| extracellular matrix structural constituent conferring tensile strength |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- G: Carbohydrate transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| C-type lectin fold |
| Collagen IV, non-collagenous domain superfamily |
| Collagen IV, non-collagenous |
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110034 | X-linked Alport syndrome | |
| DOID:10983 | Alport syndrome | |
| DOID:423 | myopathy | |
| DOID:576 | proteinuria | |
| DOID:854 | collagen disease |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12830 | MGI:88456 | MOUSE65952 | ||
| 33727 | FB:FBgn0000299 | |||
| 176314 | WB:WBGene00001263 | |||
| 181708 | WB:WBGene00002280 | |||
| 323561 | ZFIN:ZDB-GENE-030131-2281 | DANRE40795 | ||
| 363457 | RGD:1565499 | RATNO44886 | ||
| 403466 | CANLF20047 | |||
| 465805 | 9598_0:005719 | PANTR46570 | ||
| 511602 | BOVIN36722 | |||
| 703814 | MACMU48293 |
