Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type XI alpha 2 chain
Summary
- Gene Symbol
-
- COL11A2
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- Alternative splicing
- Calcium
- Collagen
- Disease variant
- Disulfide bond
- Dwarfism
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Non-syndromic deafness
- Proteomics identification
- Reference proteome
- Repeat
- Ribosomal protein
- Signal
- Stickler syndrome
- Proteins
| UniProt | Protein Name |
|---|---|
| A0A0G2JL78 |
|
| P13942 |
|
| Q4VXY6 |
|
| A0A0C4DFS1 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| sensory perception of sound | ||
| roof of mouth development | ||
| collagen fibril organization | ||
| cartilage development | ||
| soft palate development |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| extracellular region | ||
| collagen trimer | ||
| collagen type XI trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| heparin binding | ||
| metal ion binding | ||
| protein-macromolecule adaptor activity | ||
| extracellular matrix structural constituent conferring tensile strength |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen alpha
- Functional Category
-
- E: Amino acid transport and metabolism
- I: Lipid transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| Collagen triple helix repeat |
| Fibrillar collagen, C-terminal |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0080026 | otospondylomegaepiphyseal dysplasia, autosomal recessive | |
| DOID:0080046 | Stickler syndrome | |
| DOID:0080673 | fibrochondrogenesis 2 | |
| DOID:0080677 | otospondylomegaepiphyseal dysplasia, autosomal dominant | |
| DOID:0110509 | autosomal recessive nonsyndromic deafness 53 | |
| DOID:0110545 | autosomal dominant nonsyndromic deafness 13 | |
| DOID:2256 | osteochondrodysplasia | |
| DOID:674 | cleft palate |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12815 | MGI:88447 | MOUSE20060 | ||
| 294279 | RGD:2373 | RATNO22648 | ||
| 481734 | CANLF02618 | |||
| 515435 | BOVIN18265 | |||
| 561679 | ZFIN:ZDB-GENE-000208-23 | DANRE16101 | ||
| 718050 | MACMU34561 | |||
| 100008787 | RABIT02310 | |||
| 100061226 | HORSE18565 | |||
| 100409229 | CALJA30455 | |||
| 100435198 | 9601_0:001b65 | PONAB31310 |
