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Repository for lectin-assisted multimodality data
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MIRAGE
cadherin related 23 (otocadherin)
Summary
- Gene Symbol
-
- Cdh23
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Calcium
- Cell adhesion
- Cell membrane
- Disease variant
- Glycoprotein
- Hearing
- Metal-binding
- Non-syndromic deafness
- Proteomics identification
- Reference proteome
- Repeat
- Signal
- Transmembrane helix
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| calcium ion transport | ||
| calcium ion transport | ||
| cell adhesion | ||
| homophilic cell adhesion via plasma membrane adhesion molecules | ||
| sensory perception of sound |
| GO Term | Evidence Code | PMID |
|---|---|---|
| photoreceptor inner segment | ||
| centrosome | ||
| plasma membrane | ||
| catenin complex | ||
| stereocilium |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| calcium ion binding | ||
| protein binding | ||
| beta-catenin binding | ||
| cadherin binding |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Cadherin
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- Q: Secondary metabolites biosynthesis, transport and catabolism
| Gene Ontology |
|---|
| calcium ion binding |
| homophilic cell adhesion via plasma membrane adhesion molecules |
| InterPro |
|---|
| Cadherin conserved site |
| Cadherin-like superfamily |
| Cadherin-like |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110467 | autosomal recessive nonsyndromic deafness 12 | |
| DOID:0110831 | Usher syndrome type 1D |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 22295 | Xenbase:XB-GENE-957613 | ||
| 41441 | ZFIN:ZDB-GENE-040513-7 | ||
| 64072 | Xenbase:XB-GENE-957613 | HUMAN01547 | |
| 92211 | FB:FBgn0037963 | ||
| 114102 | Xenbase:XB-GENE-957613 | RATNO22088 | |
| 450516 | PANTR00842 | ||
| 709433 | MACMU45865 | ||
| 784716 | BOVIN22492 | ||
| 100077192 | ORNAN18135 | ||
| 100146534 | HORSE18010 |
