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staphylococcal nuclease and tudor domain containing 1

Summary

Gene Symbol

SND1

Organism

Homo sapiens (human)

External Links

NCBI Gene

27044

PubChem

27044

Alliance of Genome Resources

HGNC:30646

JoGo

SND1

TogoVar

SND1

Annotation

Keyword

3D-structure
Acetylation
Cytoplasm
Direct protein sequencing
Endonuclease
Host-virus interaction
Isopeptide bond
Nucleus
Phosphoprotein
Proteomics identification
Reference proteome
Repeat
Transcription regulation
Ubl conjugation

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A0A140VK49
Q7KZF4	100 kDa coactivator EBNA2 coactivator p100 Tudor domain-containing protein 11 p100 co-activator

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 6 in total

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2

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GO Term	Evidence Code	PMID
osteoblast differentiation	HDA	16210410
mRNA catabolic process	IBA
regulation of cell cycle process	IMP	28546213
miRNA catabolic process	IDA	28546213
gene silencing by RNA	IEA

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

catabolic process [inference]

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

mRNA metabolic process [inference]

mRNA catabolic process

ncRNA metabolic process [inference]

miRNA metabolic process [inference]

miRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

mRNA catabolic process

ncRNA catabolic process [inference]

miRNA catabolic process

cellular developmental process [inference]

cell differentiation [inference]

osteoblast differentiation

developmental process [inference]

cellular developmental process [inference]

cell differentiation [inference]

osteoblast differentiation

biological regulation [inference]

regulation of biological process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of metabolic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cellular metabolic process [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of biological process [inference]

negative regulation of metabolic process [inference]

negative regulation of biosynthetic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule metabolic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular process [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cellular process [inference]

regulation of cellular metabolic process [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

negative regulation of gene expression [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

negative regulation of cellular process [inference]

negative regulation of cellular metabolic process [inference]

negative regulation of cellular biosynthetic process [inference]

negative regulation of macromolecule biosynthetic process [inference]

negative regulation of gene expression [inference]

regulation of cell cycle [inference]

regulation of cell cycle process

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
nucleus	IBA
cytosol	TAS
cytosol	IDA
cytosol	IBA
membrane	HDA	16210410

GO Hierarchy

cellular component

protein-containing complex [inference]

ribonucleoprotein complex [inference]

RNAi effector complex

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

pigment granule [inference]

melanosome

extracellular vesicle [inference]

extracellular exosome

intracellular membrane-bounded organelle [inference]

nucleus

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

pigment granule [inference]

melanosome

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

pigment granule [inference]

melanosome

extracellular organelle [inference]

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

dense body

Displaying entries **1 - 5** of 11 in total

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GO Term	Evidence Code	PMID
transcription coregulator activity	TAS	7651391
RNA binding	IDA	18453631
RNA binding	IBA
RNA binding	HDA	22658674 22681889
nuclease activity	IBA

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on ester bonds [inference]

nuclease activity

endonuclease activity

RNA nuclease activity [inference]

RNA endonuclease activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on RNA [inference]

RNA nuclease activity [inference]

RNA endonuclease activity

binding [inference]

protein binding

cell adhesion molecule binding [inference]

cadherin binding

protein-containing complex binding [inference]

ribonucleoprotein complex binding [inference]

RISC complex binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

RNA binding

transcription regulator activity [inference]

transcription coregulator activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

nuclease

Functional Category

L: Replication, recombination and repair
M: Cell wall/membrane/envelope biogenesis
P: Inorganic ion transport and metabolism

Displaying **all 3** entries
Gene Ontology
mRNA catabolic process
nuclease activity
regulatory ncRNA-mediated gene silencing

Displaying **all 4** entries
InterPro
RNA-induced silencing complex, nuclease component Tudor-SN
SNase-like, OB-fold superfamily
Staphylococcal nuclease (SNase-like), OB-fold
Tudor domain

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements