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rhodopsin

Summary

Gene Symbol

Organism

Danio rerio (zebrafish)

External Links

NCBI Gene

30295

PubChem

30295

Alliance of Genome Resources

ZFIN:ZDB-GENE-990415-271

Annotation

Keyword

Cell projection
Disulfide bond
G-protein coupled receptor
Glycoprotein
Phosphoprotein
Reference proteome
Retinal protein
Transmembrane helix
Vision

Proteins

Displaying 1 entry
UniProt	Protein Name
P35359

Annotation information from UniProt.

Gene Ontology (GO)

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GO Term	Evidence Code	PMID
signal transduction	IEA
G protein-coupled receptor signaling pathway	IBA
G protein-coupled receptor signaling pathway	IEA
visual perception	IEA
phototransduction	IBA

GO Hierarchy

biological process

cellular process [inference]

signal transduction

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

light absorption [inference]

absorption of visible light

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus

phototransduction

rhodopsin mediated signaling pathway

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

detection of light stimulus

phototransduction

rhodopsin mediated signaling pathway

cellular response to light stimulus

rhodopsin mediated signaling pathway

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of abiotic stimulus [inference]

detection of light stimulus

phototransduction

rhodopsin mediated signaling pathway

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus

phototransduction

rhodopsin mediated signaling pathway

detection of abiotic stimulus [inference]

detection of light stimulus

phototransduction

rhodopsin mediated signaling pathway

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

signal transduction

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
photoreceptor outer segment	IDA	18492793
photoreceptor outer segment	IBA
plasma membrane	ISS
plasma membrane	IBA
membrane	ISS	26098991

GO Hierarchy

cellular component

cellular anatomical entity [inference]

photoreceptor outer segment

membrane

plasma membrane

organelle membrane [inference]

photoreceptor disc membrane

cell projection

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GO Term	Evidence Code	PMID
G protein-coupled receptor activity	IEA
11-cis retinal binding	ISS
G protein-coupled photoreceptor activity	IDA	21416149
G protein-coupled photoreceptor activity	IBA
photoreceptor activity	IDA	27811293

GO Hierarchy

molecular function

binding [inference]

lipid binding [inference]

isoprenoid binding [inference]

retinoid binding [inference]

retinal binding

11-cis retinal binding

small molecule binding [inference]

vitamin binding [inference]

retinal binding

11-cis retinal binding

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity

G protein-coupled photoreceptor activity

photoreceptor activity

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

Alliance of Genome Resources

Expression

Displaying **all 2** entries
Location	References
photoreceptor outer segment	PMID:11517263 PMID:21816947 PMID:25144710 PMID:27470972 PMID:28118669 PMID:29203866 PMID:30052645 PMID:34445569
rod photoreceptor outer segment	PMID:15804565 PMID:31362982 PMID:34095146 PMID:37141637

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:10584	retinitis pigmentosa	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 24 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	6010	Xenbase:XB-GENE-966887
Xenopus tropicalis	24717	Xenbase:XB-GENE-966887
Xenopus tropicalis	30295	Xenbase:XB-GENE-966887
Xenopus tropicalis	30459	Xenbase:XB-GENE-966887
Xenopus tropicalis	212541	Xenbase:XB-GENE-966887
Xenopus tropicalis	380209	Xenbase:XB-GENE-966887
Xenopus tropicalis	562845	Xenbase:XB-GENE-966887
Takifugu rubripes	778011		TAKRU37789
Xenopus tropicalis	100037900	Xenbase:XB-GENE-966887
Oryzias latipes	100049259		ORYLA15896

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