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starch binding domain 1

Summary

Gene Symbol

Stbd1

Organism

Rattus norvegicus (Norway rat)

External Links

NCBI Gene

305234

PubChem

305234

Alliance of Genome Resources

RGD:1311800

Annotation

Keyword

Autophagy
Cell membrane
Endoplasmic reticulum
Glycogen metabolism
Phosphoprotein
Reference proteome
Signal-anchor
Transmembrane helix
Ubl conjugation

Proteins

Displaying **all 2** entries
UniProt	Protein Name
Q5FVN1	Genethonin-1 Glycophagy cargo receptor stbd1
A6KK65

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
glycophagy	ISO ISS
substrate localization to autophagosome	ISO
glycogen catabolic process	ISO ISS
vesicle-mediated transport	ISO
intracellular transport	ISO

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

cellular catabolic process [inference]

autophagy [inference]

macroautophagy [inference]

glycophagy

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process [inference]

glycogen catabolic process

cellular catabolic process [inference]

autophagy [inference]

macroautophagy [inference]

glycophagy

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process [inference]

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process [inference]

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

glucan metabolic process [inference]

glycogen metabolic process [inference]

glycogen catabolic process

glucan catabolic process [inference]

glycogen catabolic process

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

glucan catabolic process [inference]

glycogen catabolic process

cellular process [inference]

vesicle-mediated transport

endocytosis

cellular metabolic process [inference]

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

energy reserve metabolic process [inference]

glycogen metabolic process [inference]

glycogen catabolic process

cellular catabolic process [inference]

autophagy [inference]

macroautophagy [inference]

glycophagy

cellular localization [inference]

intracellular transport

process utilizing autophagic mechanism [inference]

autophagy [inference]

macroautophagy [inference]

glycophagy

localization [inference]

establishment of localization [inference]

transport [inference]

vesicle-mediated transport

endocytosis

intracellular transport

import into cell [inference]

endocytosis

establishment of localization in cell [inference]

cellular localization [inference]

intracellular transport

Displaying entries **6 - 7** of 7 in total

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GO Term	Evidence Code	PMID
membrane	IBA ISO ISS
perinuclear region of cytoplasm	ISO ISS

GO Hierarchy

cellular component

cellular anatomical entity [inference]

plasma membrane

organelle membrane [inference]

endoplasmic reticulum membrane

phagophore assembly site membrane

T-tubule

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

endoplasmic reticulum

perinuclear region of cytoplasm

Displaying **all 5** entries
GO Term	Evidence Code	PMID
starch binding	IEA
enzyme binding	ISO
cargo receptor activity	ISO
glycogen binding	IEA ISO ISS
polysaccharide binding	ISO

GO Hierarchy

molecular function

binding [inference]

protein binding [inference]

enzyme binding

carbohydrate binding [inference]

polysaccharide binding

cargo receptor activity

Gene Ontology information from NCBI Gene and UniProt.

Ortholog

Displaying entries **1 - 10** of 43 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Danio rerio	792854	ZFIN:ZDB-GENE-120817-2
Xenopus tropicalis	100490725	Xenbase:XB-GENE-6456228
Sarcophilus harrisii	100923538		SARHA16024
Erinaceus europaeus	103110651		ERIEU10918
Cercocebus atys	105576852		CERAT13599
Macaca nemestrina	105477259		MACNE18108
Papio anubis	101008372		PAPAN28514
Mandrillus leucophaeus	105529119		MANLE04791
Gorilla gorilla gorilla	109023067		GORGO31935
Pan paniscus	100990942		PANPA30226

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Supported by JST NBDC Grant Number JPMJND2204

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Last updated: August 19, 2024