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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Y-box binding protein 1
Summary
- Gene Symbol
-
- YBX1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Acetylation
- Activator
- Cytoplasm
- DNA-binding
- Direct protein sequencing
- Isopeptide bond
- Mitogen
- Nucleus
- Phosphoprotein
- RNA-binding
- Reference proteome
- Repressor
- Secreted
- Transcription regulation
- Ubl conjugation
- mRNA splicing
- Proteins
| UniProt | Protein Name |
|---|---|
| P67809 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| mRNA stabilization | ||
| positive regulation of cell division | ||
| protein localization to cytoplasmic stress granule | ||
| RNA splicing | ||
| epidermis development |
GO Hierarchy
biological process
metabolic process [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
negative regulation of metabolic process [inference]
positive regulation of metabolic process [inference]
regulation of catabolic process [inference]
regulation of cellular metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
negative regulation of cellular metabolic process [inference]
regulation of cellular biosynthetic process [inference]
regulation of nitrogen compound metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of primary metabolic process [inference]
positive regulation of biological process [inference]
negative regulation of biological process [inference]
negative regulation of metabolic process [inference]
negative regulation of cellular process [inference]
regulation of cellular process [inference]
regulation of cellular metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
negative regulation of cellular metabolic process [inference]
regulation of cellular biosynthetic process [inference]
positive regulation of cellular process [inference]
negative regulation of cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| histone pre-mRNA 3'end processing complex | ||
| cytoplasmic stress granule | ||
| ribonucleoprotein complex | ||
| intracellular membrane-bounded organelle | ||
| plasma membrane |
| GO Term | Evidence Code | PMID |
|---|---|---|
| nucleic acid binding | ||
| protein binding | ||
| DNA binding | ||
| GTPase binding | ||
| C5-methylcytidine-containing RNA reader activity |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Y-box-binding protein 1
- Functional Category
-
- K: Transcription
- T: Signal transduction mechanisms
- V: Defense mechanisms
| Gene Ontology |
|---|
| C5-methylcytidine-containing RNA reader activity |
| CRD-mediated mRNA stabilization |
| GTPase binding |
| RNA transport |
| cellular response to interleukin-7 |
| chromatin binding |
| epidermis development |
| in utero embryonic development |
| mRNA stabilization |
| miRNA binding |
| InterPro |
|---|
| Cold shock domain |
| Cold-shock (CSD) domain |
| Cold-shock protein, DNA-binding |
| Nucleic acid-binding, OB-fold |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:5844 | myocardial infarction |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 22608 | MGI:99146 | MOUSE41562 | ||
| 29206 | RGD:1590933 | |||
| 39377 | FB:FBgn0022959 | |||
| 174690 | WB:WBGene00000472 | |||
| 176516 | WB:WBGene00000475 | |||
| 379054 | Xenbase:XB-GENE-865405 | |||
| 380022 | Xenbase:XB-GENE-17338642 | |||
| 445951 | TAKRU37399 | |||
| 500538 | RGD:61843 | RATNO33125 | ||
| 549431 | Xenbase:XB-GENE-480746 |
