GlyCosmos Portal

Displaying entries **6 - 10** of 13 in total

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GO Term	Evidence Code	PMID
nuclear pore	IDA NAS	10087256 12802065 15229283 9348540
nuclear periphery	IDA	11839768 15229283
nuclear body	IDA	28221134
nuclear envelope	IDA TAS	15146057 28221134
nuclear pore cytoplasmic filaments	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

ribonucleoprotein complex

cellular anatomical entity [inference]

intracellular anatomical structure [inference]

inclusion body [inference]

nuclear inclusion body

membrane [inference]

organelle membrane [inference]

nuclear membrane

nuclear body

envelope [inference]

organelle envelope [inference]

nuclear envelope

nuclear periphery

organelle [inference]

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

kinetochore

intracellular organelle [inference]

intracellular non-membrane-bounded organelle [inference]

kinetochore

supramolecular complex [inference]

kinetochore

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
protein binding	IPI	15146057 17172455 18832153 20498086 25562883 28221134 30543681 32353859 33060197 33097660 33765414 33849972 33961781 35096974 9348540
promoter-specific chromatin binding	IMP	28221134
nuclear localization sequence binding	IBA
structural constituent of nuclear pore	IBA IMP NAS	15229283 9348540
transcription coactivator activity	IMP	28221134

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

peptidase activity [inference]

serine-type peptidase activity

serine hydrolase activity [inference]

serine-type peptidase activity

catalytic activity, acting on a protein [inference]

peptidase activity [inference]

serine-type peptidase activity

structural molecule activity [inference]

structural constituent of nuclear pore

binding [inference]

protein binding

amide binding [inference]

peptide binding [inference]

signal sequence binding [inference]

nuclear localization sequence binding

protein-containing complex binding [inference]

chromatin binding [inference]

promoter-specific chromatin binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

RNA binding

mRNA binding

molecular adaptor activity [inference]

protein-macromolecule adaptor activity [inference]

molecular condensate scaffold activity

transcription regulator activity [inference]

transcription coregulator activity [inference]

transcription coactivator activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Nuclear pore complex protein

Functional Category

E: Amino acid transport and metabolism
K: Transcription
T: Signal transduction mechanisms

Displaying **all 6** entries
Gene Ontology
RNA export from nucleus
mRNA transport
nuclear localization sequence binding
post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
protein import into nucleus
telomere tethering at nuclear periphery

Displaying **all 4** entries
InterPro
Nuclear pore complex protein NUP96, C-terminal domain
Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamily
Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain
Nucleoporin peptidase S59-like

Disease

Disease Ontology

Displaying **all 2** entries
DO ID	Disease Name	Source
DOID:5603	T-cell acute lymphoblastic leukemia	Alliance of Genome Resources
DOID:9119	acute myeloid leukemia	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 82 in total

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Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Drosophila melanogaster	42816		FB:FBgn0039120
Rattus norvegicus	81738		RGD:71033	RATNO15522
Caenorhabditis elegans	175852		WB:WBGene00003796
Mus musculus	269966		MGI:109404	MOUSE56573
Pan troglodytes	450971	9598_0:003004		PANTR02077
Canis lupus familiaris	476822			CANLF08320
Bos taurus	540004			BOVIN07123
Macaca mulatta	717608			MACMU09744
Danio rerio	777756		ZFIN:ZDB-GENE-040426-1180	DANRE21574
Saccharomyces cerevisiae S288C	852788		SGD:S000003060

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Summary

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Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements