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Glycoconjugate Repository

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Glycomics MS raw data Repository

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Glycomics MS Repository for glycan annotations from GlycoWorkbench

LM-GlycoRepo

Repository for lectin-assisted multimodality data

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Tools

Glycan Converters

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Search Tools

Cross Search Glycan Search Publication Search Programmatic Access

Guidelines

MIRAGE

zinc finger CCHC-type containing 8

Summary

Gene Symbol

ZCCHC8

Organism

Homo sapiens (human)

External Links

NCBI Gene

55596

PubChem

55596

Alliance of Genome Resources

HGNC:25265

JoGo

ZCCHC8

TogoVar

ZCCHC8

Annotation

Keyword

3D-structure
Acetylation
Alternative splicing
Coiled coil
Disease variant
Isopeptide bond
Nucleus
Phosphoprotein
Proteomics identification
Reference proteome
Spliceosome
Ubl conjugation
Zinc-finger

Proteins

Displaying 1 entry
UniProt	Protein Name
Q6NZY4	TRAMP-like complex RNA-binding factor ZCCHC8

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
mRNA splicing, via spliceosome	IC	11991638
RNA processing	IBA
snRNA catabolic process	ISS
mRNA 3'-end processing	IMP	31488579

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

catabolic process [inference]

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

organic cyclic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular catabolic process [inference]

aromatic compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

cellular nitrogen compound catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

mRNA processing [inference]

RNA splicing [inference]

RNA splicing, via transesterification reactions [inference]

RNA splicing, via transesterification reactions with bulged adenosine as nucleophile [inference]

mRNA splicing, via spliceosome

RNA 3'-end processing [inference]

mRNA 3'-end processing

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

mRNA metabolic process [inference]

mRNA processing [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA catabolic process

ncRNA catabolic process [inference]

snRNA catabolic process

heterocycle catabolic process [inference]

nucleobase-containing compound catabolic process [inference]

RNA catabolic process [inference]

ncRNA catabolic process [inference]

snRNA catabolic process

Displaying entries **6 - 7** of 7 in total

« First

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1

2
GO Term	Evidence Code	PMID
catalytic step 2 spliceosome	IDA	11991638
catalytic step 2 spliceosome	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

spliceosomal complex [inference]

catalytic step 2 spliceosome

TRAMP complex

catalytic complex [inference]

catalytic step 2 spliceosome

ribonucleoprotein complex [inference]

spliceosomal complex [inference]

catalytic step 2 spliceosome

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

nucleolus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular non-membrane-bounded organelle [inference]

nucleolus

Displaying **all 5** entries
GO Term	Evidence Code	PMID
RNA binding	IDA	31488579
RNA binding	IBA
RNA binding	HDA	22658674
protein binding	IPI	16263084 17525332 25525152 25578728 26496610 27871484 27905398 28514442 29844170 31358741 33961781 35914814
zinc ion binding	IEA

GO Hierarchy

molecular function

binding [inference]

protein binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

transition metal ion binding [inference]

zinc ion binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

RNA binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

uncharacterized protein, isoform A

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
zinc ion binding

Displaying **all 2** entries
InterPro
PSP, proline-rich
Zinc finger, CCHC-type

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Acknowledgements

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Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: April 6, 2026