Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Summary
- Gene Symbol
-
- CSGALNACT1
- Aliases
-
- CSGalNAcT-1
- ChGn
- FLJ11264
- chondroitin beta1,4 N-acetylgalactosaminyltransferase
- glucuronylgalactosylproteoglycan 4-beta-N- acetylgalactosaminyltransferase
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- Alternative splicing
- Coiled coil
- Disease variant
- Dwarfism
- Glycoprotein
- Golgi apparatus
- Metal-binding
- Reference proteome
- Signal-anchor
- Transferase
- Transmembrane helix
- Proteins
| UniProt | Protein Name |
|---|---|
| Q8TDX6 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| heparin biosynthetic process | ||
| UDP-N-acetylgalactosamine metabolic process |
GO Hierarchy
biological process
metabolic process [inference]
nitrogen compound metabolic process [inference]
biosynthetic process [inference]
cellular metabolic process [inference]
primary metabolic process [inference]
organic substance metabolic process [inference]
cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| Golgi cisterna membrane | ||
| Golgi membrane |
| GO Term | Evidence Code | PMID |
|---|---|---|
| acetylgalactosaminyltransferase activity | ||
| glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | ||
| glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | ||
| metal ion binding | ||
| peptidoglycan glycosyltransferase activity |
GlycoGene Database (GGDB)
- GGDB ID
- gg165
- Gene Symbol
-
- CSGALNACT1
- Reactions
G14371GV
G40609EP
G40723NG
G97081WO
G76533UX
G70907ST
G33235EO
G48258CR
G07747BZ
- Orthologous Gene
| Species | Protein | mRNA |
|---|---|---|
| Rattus norvegicus | XP_224757 | XM_224757 |
| Drosophila melanogaster | NP_610567 | NM_136723 |
| Mus musculus | NP_766341 | NM_172753 |
KEGG BRITE Database
Rhea
Disease
- Disease Ontology
- The Human Phenotype Ontology
| HPO ID | HPO Term |
|---|---|
| HP:0003510 | Severe short stature |
| HP:0003691 | Scapular winging |
| HP:0004209 | Clinodactyly of the 5th finger |
| HP:0004322 | Short stature |
| HP:0004691 | 2-3 toe syndactyly |
| HP:0005180 | Tricuspid regurgitation |
| HP:0005274 | Prominent nasal tip |
| HP:0005280 | Depressed nasal bridge |
| HP:0005616 | Accelerated skeletal maturation |
| HP:0006094 | Finger joint hypermobility |
| Disease ID | Disease Name |
|---|---|
| OMIM:618870 |
|
| ORPHA:1425 |
|
PubChem Disease
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 36079 | FB:FBgn0033500 | ||
| 103186731 | CALMI35330 | ||
| 102366614 | LATCH11092 | ||
| 793671 | ZFIN:ZDB-GENE-121129-1 | DANRE01642 | |
| 101886904 | ZFIN:ZDB-GENE-130530-957 | ||
| 103045746 | ASTMX12859 | ||
| 105026679 | ESOLU40426 | ||
| 106561858 | SALSA70963 | ||
| 106568408 | SALSA29109 | ||
| 115149376 | SALTR17682 |
