Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
chondroitin sulfate N-acetylgalactosaminyltransferase 1
Summary
- Gene Symbol
-
- CSGALNACT1
- Aliases
-
- CSGalNAcT-1
- ChGn
- FLJ11264
- chondroitin beta1,4 N-acetylgalactosaminyltransferase
- glucuronylgalactosylproteoglycan 4-beta-N- acetylgalactosaminyltransferase
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- Alternative splicing
- Coiled coil
- Disease variant
- Dwarfism
- Glycoprotein
- Golgi apparatus
- Metal-binding
- Reference proteome
- Signal-anchor
- Transferase
- Transmembrane helix
- Proteins
| UniProt | Protein Name |
|---|---|
| Q8TDX6 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| heparin biosynthetic process | ||
| UDP-N-acetylgalactosamine metabolic process |
GO Hierarchy
biological process
metabolic process [inference]
nitrogen compound metabolic process [inference]
biosynthetic process [inference]
cellular metabolic process [inference]
primary metabolic process [inference]
organic substance metabolic process [inference]
cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| Golgi cisterna membrane | ||
| Golgi membrane |
| GO Term | Evidence Code | PMID |
|---|---|---|
| acetylgalactosaminyltransferase activity | ||
| glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | ||
| glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | ||
| metal ion binding | ||
| peptidoglycan glycosyltransferase activity |
GlycoGene Database (GGDB)
- GGDB ID
- gg165
- Gene Symbol
-
- CSGALNACT1
- Reactions
G14371GV
G40609EP
G40723NG
G97081WO
G76533UX
G70907ST
G33235EO
G48258CR
G07747BZ
- Orthologous Gene
| Species | Protein | mRNA |
|---|---|---|
| Rattus norvegicus | XP_224757 | XM_224757 |
| Drosophila melanogaster | NP_610567 | NM_136723 |
| Mus musculus | NP_766341 | NM_172753 |
KEGG BRITE Database
Rhea
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110741 | type 1 diabetes mellitus 2 | |
| DOID:0110742 | type 1 diabetes mellitus 3 | |
| DOID:0110743 | type 1 diabetes mellitus 4 | |
| DOID:0110744 | type 1 diabetes mellitus 5 | |
| DOID:0110745 | type 1 diabetes mellitus 6 | |
| DOID:0110746 | type 1 diabetes mellitus 7 | |
| DOID:0110747 | type 1 diabetes mellitus 8 | |
| DOID:0110748 | obsolete type 1 diabetes mellitus 9 | |
| DOID:0110749 | type 1 diabetes mellitus 10 | |
| DOID:0110750 | type 1 diabetes mellitus 11 |
- The Human Phenotype Ontology
| HPO ID | HPO Term |
|---|---|
| HP:0007018 | Attention deficit hyperactivity disorder |
| HP:0007165 | Periventricular heterotopia |
| HP:0008070 | Sparse hair |
| HP:0008873 | Disproportionate short-limb short stature |
| HP:0010318 | Aplasia/Hypoplasia of the abdominal wall musculature |
| HP:0010880 | Increased nuchal translucency |
| HP:0011800 | Midface retrusion |
| HP:0100490 | Camptodactyly of finger |
| HP:0200055 | Small hand |
| Disease ID | Disease Name |
|---|---|
| OMIM:618870 |
|
| ORPHA:1425 |
|
PubChem Disease
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 105992963 | DIPOR01118 | ||
| 100754969 | CRIGR06729 | ||
| 234356 | MGI:2442354 | MOUSE58790 | |
| 306375 | RGD:1307618 | RATNO11471 | |
| 100725703 | CAVPO00853 | ||
| 101591356 | OCTDE08242 | ||
| 101867699 | MELUD07308 | ||
| 100030310 | MONDO09372 | ||
| 102447091 | PELSI09945 | ||
| 100560783 | ANOCA08338 |
