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MIRAGE
collagen, type XXVII, alpha 1b
Summary
- Gene Symbol
-
- col27a1b
- Organism
- Danio rerio (zebrafish)
Annotation
- Keyword
-
- Calcium
- Collagen
- Developmental protein
- Disulfide bond
- Extracellular matrix
- Glycoprotein
- Metal-binding
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| A0MSJ1 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| skeletal system development | ||
| extracellular matrix organization | ||
| bone mineralization | ||
| notochord morphogenesis |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular region | ||
| collagen trimer | ||
| collagen type IX trimer | ||
| extracellular space | ||
| collagen-containing extracellular matrix |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular matrix structural constituent | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| metal ion binding |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Collagen alpha-1(XXVII) chain
- Functional Category
-
- G: Carbohydrate transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| Collagen triple helix repeat |
| Fibrillar collagen, C-terminal |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 85301 | Xenbase:XB-GENE-6032747 | ||
| 373864 | Xenbase:XB-GENE-6032747 | ||
| 560145 | Xenbase:XB-GENE-6032747 | ||
| 100004688 | HGNC:22986 |
