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protocadherin beta 6

Summary

Gene Symbol

PCDHB6

Organism

Homo sapiens (human)

External Links

NCBI Gene

56130

PubChem

56130

Alliance of Genome Resources

HGNC:8691

Annotation

Keyword

Calcium
Cell adhesion
Cell membrane
Disulfide bond
Glycoprotein
Metal-binding
Proteomics identification
Reference proteome
Repeat
Signal
Transmembrane helix

Proteins

Displaying **all 3** entries
UniProt	Protein Name
Q9Y5E3
A0A096LNH7
B4DSB6

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 7 in total

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GO Term	Evidence Code	PMID
cell adhesion	IBA
homophilic cell adhesion via plasma membrane adhesion molecules	ISS
chemical synaptic transmission	TAS	12231349
nervous system development	TAS	10380929
synapse assembly	TAS	12231349

GO Hierarchy

biological process

cellular process [inference]

cell communication [inference]

cell-cell signaling [inference]

synaptic signaling [inference]

trans-synaptic signaling [inference]

anterograde trans-synaptic signaling [inference]

chemical synaptic transmission

cell adhesion

cell-cell adhesion [inference]

cell-cell adhesion via plasma-membrane adhesion molecules [inference]

cell recognition [inference]

cell-cell recognition

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

cell junction assembly [inference]

synapse assembly

cell junction organization [inference]

cell junction assembly [inference]

synapse assembly

synapse organization [inference]

synapse assembly

developmental process [inference]

anatomical structure development [inference]

system development [inference]

nervous system development

biological regulation [inference]

regulation of biological process [inference]

signaling [inference]

cell-cell signaling [inference]

synaptic signaling [inference]

trans-synaptic signaling [inference]

anterograde trans-synaptic signaling [inference]

chemical synaptic transmission

Displaying **all 4** entries
GO Term	Evidence Code	PMID
plasma membrane	ISS
plasma membrane	IBA
membrane	NAS	11322959
synapse	IEA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane

plasma membrane

cell junction [inference]

synapse

Displaying **all 2** entries
GO Term	Evidence Code	PMID
calcium ion binding	ISS
identical protein binding	ISS

GO Hierarchy

molecular function

binding [inference]

protein binding [inference]

identical protein binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

cadherin

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
Q: Secondary metabolites biosynthesis, transport and catabolism

Displaying **all 2** entries
Gene Ontology
calcium ion binding
homophilic cell adhesion via plasma membrane adhesion molecules

Displaying **all 3** entries
InterPro
Cadherin conserved site
Cadherin-like superfamily
Cadherin-like

Ortholog

Displaying entries **1 - 10** of 74 in total

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Species	Gene ID	Alliance of Genome Resources
Danio rerio	5098	ZFIN:ZDB-GENE-050609-8
Danio rerio	8641	ZFIN:ZDB-GENE-050610-7
Danio rerio	9708	ZFIN:ZDB-GENE-050610-7
Danio rerio	25133	ZFIN:ZDB-GENE-050610-1
Danio rerio	26025	ZFIN:ZDB-GENE-050610-7
Danio rerio	26167	ZFIN:ZDB-GENE-050610-1
Danio rerio	29930	ZFIN:ZDB-GENE-050610-7
Danio rerio	56099	ZFIN:ZDB-GENE-050610-7
Danio rerio	56100	ZFIN:ZDB-GENE-050610-7
Danio rerio	56101	ZFIN:ZDB-GENE-050610-7