GlyCosmos Portal

Displaying entries **1 - 5** of 29 in total

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GO Term	Evidence Code	PMID
nucleus	IDA	14988002 16814409 17560175 18045535 19059439 19460357 20041225
nucleus	IMP	21399639 21871177
nucleus	IBA
nucleoplasm	TAS
nucleolus	IDA	19460357

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

NF-kappaB complex

ribonucleoprotein complex

ribosomal subunit [inference]

small ribosomal subunit [inference]

cytosolic small ribosomal subunit

cellular anatomical entity [inference]

membrane

plasma membrane

organelle membrane [inference]

organelle inner membrane [inference]

mitochondrial inner membrane

mitochondrial membrane [inference]

mitochondrial inner membrane

plasma membrane region [inference]

cell projection membrane [inference]

ruffle membrane

cell junction [inference]

anchoring junction [inference]

cell-substrate junction [inference]

focal adhesion

leading edge membrane [inference]

ruffle membrane

membrane-enclosed lumen [inference]

organelle lumen [inference]

intracellular organelle lumen [inference]

mitochondrial matrix

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

extracellular vesicle [inference]

extracellular exosome

intracellular membrane-bounded organelle [inference]

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

nucleolus

spindle [inference]

mitotic spindle

ribosome

cytosolic ribosome

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

nucleolus

spindle [inference]

mitotic spindle

ribosome

cytosolic ribosome

extracellular organelle [inference]

extracellular membrane-bounded organelle [inference]

extracellular vesicle [inference]

extracellular exosome

postsynaptic specialization [inference]

postsynaptic density

Displaying entries **1 - 5** of 33 in total

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GO Term	Evidence Code	PMID
RNA polymerase II transcription regulatory region sequence-specific DNA binding	IMP	18045535
DNA binding	IDA	18610840
damaged DNA binding	IDA	14706345 15518571 16737853 17560175 18610840
RNA binding	IDA	20217897
RNA binding	HDA	22658674 22681889

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on ester bonds [inference]

nuclease activity [inference]

endonuclease activity [inference]

endodeoxyribonuclease activity

DNA nuclease activity [inference]

endodeoxyribonuclease activity

hydrolase activity, acting on glycosyl bonds [inference]

hydrolase activity, hydrolyzing N-glycosyl compounds [inference]

DNA N-glycosylase activity

lyase activity [inference]

carbon-oxygen lyase activity [inference]

class I DNA-(apurinic or apyrimidinic site) endonuclease activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on DNA [inference]

DNA-(apurinic or apyrimidinic site) endonuclease activity

class I DNA-(apurinic or apyrimidinic site) endonuclease activity

DNA nuclease activity [inference]

endodeoxyribonuclease activity

DNA N-glycosylase activity

structural molecule activity [inference]

structural constituent of ribosome

binding [inference]

protein binding

cytoskeletal protein binding [inference]

tubulin binding

microtubule binding

transcription factor binding [inference]

DNA-binding transcription factor binding

enzyme binding

kinase binding

protein kinase binding

ubiquitin-like protein conjugating enzyme binding

heat shock protein binding [inference]

protein kinase A binding

protein-folding chaperone binding [inference]

Hsp70 protein binding

protein-containing complex binding

metal cluster binding [inference]

iron-sulfur cluster binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding

DNA binding

damaged DNA binding

oxidized DNA binding [inference]

double-stranded DNA binding [inference]

supercoiled DNA binding

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding

RNA binding

mRNA binding

rRNA binding [inference]

small ribosomal subunit rRNA binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Ribosomal protein

Functional Category

J: Translation, ribosomal structure and biogenesis
K: Transcription
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
positive regulation of apoptotic signaling pathway

Displaying **all 7** entries
InterPro
K Homology domain, type 2
K homology domain superfamily, prokaryotic type
K homology domain-like, alpha/beta
Ribosomal protein S3, C-terminal domain superfamily
Small ribosomal subunit protein uS3, C-terminal
Small ribosomal subunit protein uS3, conserved site
Small ribosomal subunit protein uS3, eukaryotic/archaeal

Ortholog

Displaying entries **1 - 10** of 76 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	6188	Xenbase:XB-GENE-978298
Mus musculus	27050	Xenbase:XB-GENE-978298	MOUSE55037
Xenopus tropicalis	42761	Xenbase:XB-GENE-978298
Rattus norvegicus	140654		RATNO16522
Bos taurus	326588		BOVIN07250
Danio rerio	336550		DANRE14566
Canis lupus familiaris	476804		CANLF08261
Macaca mulatta	695748		MACMU10852
Sus scrofa	733671		PIGXX35006
Monodelphis domestica	100010657		MONDO24310

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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OrthoDB (Group)

International Collaboration

Acknowledgements