GlyCosmos Portal

Submissions

VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog

Summary

Gene Symbol

VIPAS39

Organism

Homo sapiens (human)

External Links

NCBI Gene

63894

PubChem

63894

Alliance of Genome Resources

HGNC:20347

JoGo

VIPAS39

TogoVar

VIPAS39

Annotation

Keyword

Alternative splicing
Cytoplasm
Cytoplasmic vesicle
Disease variant
Endosome
Phosphoprotein
Protein transport
Proteomics identification
Reference proteome
Spermatogenesis
Transcription regulation

Proteins

Displaying **all 3** entries
UniProt	Protein Name
Q6IA61	VPS33B-interacting protein in apical-basolateral polarity regulator VPS33B-interacting protein in polarity and apical restriction
Q9H9C1	VPS33B-interacting protein in apical-basolateral polarity regulator VPS33B-interacting protein in polarity and apical restriction
B4DMB7	VPS33B-interacting protein in apical-basolateral polarity regulator VPS33B-interacting protein in polarity and apical restriction

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 13 in total

1

2

3

Next ›

Last »
GO Term	Evidence Code	PMID
intracellular protein transport	IMP	19109425
intracellular protein transport	IBA
vacuolar transport	IBA
spermatogenesis	IEA
endosome to lysosome transport	IMP	19109425 25783203

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein hydroxylation [inference]

peptidyl-lysine hydroxylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine hydroxylation

post-translational protein modification

collagen metabolic process

primary metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein hydroxylation [inference]

peptidyl-lysine hydroxylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine hydroxylation

post-translational protein modification

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein hydroxylation [inference]

peptidyl-lysine hydroxylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine hydroxylation

post-translational protein modification

macromolecule modification [inference]

protein modification process [inference]

protein hydroxylation [inference]

peptidyl-lysine hydroxylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine hydroxylation

post-translational protein modification

organonitrogen compound metabolic process [inference]

protein metabolic process [inference]

protein modification process [inference]

protein hydroxylation [inference]

peptidyl-lysine hydroxylation

peptidyl-amino acid modification [inference]

peptidyl-lysine modification [inference]

peptidyl-lysine hydroxylation

post-translational protein modification

cellular process [inference]

vesicle-mediated transport [inference]

endosome to lysosome transport

cellular developmental process [inference]

cell differentiation

cellular localization [inference]

intracellular transport

intracellular protein transport

vacuolar transport

lysosomal transport [inference]

endosome to lysosome transport

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport [inference]

intracellular protein transport

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

vesicle organization [inference]

vesicle fusion [inference]

phagosome-lysosome fusion

organelle fusion [inference]

organelle membrane fusion [inference]

vesicle fusion [inference]

phagosome-lysosome fusion

cellular component disassembly [inference]

protein-containing complex disassembly [inference]

autophagosome maturation

extracellular structure organization [inference]

extracellular matrix organization [inference]

collagen fibril organization

protein-containing complex organization [inference]

protein-containing complex disassembly [inference]

autophagosome maturation

external encapsulating structure organization [inference]

extracellular matrix organization [inference]

collagen fibril organization

membrane organization [inference]

membrane fusion [inference]

organelle membrane fusion [inference]

vesicle fusion [inference]

phagosome-lysosome fusion

supramolecular fiber organization [inference]

collagen fibril organization

reproductive process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

multicellular organismal reproductive process [inference]

gamete generation [inference]

male gamete generation [inference]

spermatogenesis

developmental process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

cellular developmental process [inference]

cell differentiation

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport [inference]

intracellular protein transport

establishment of localization [inference]

transport [inference]

vesicle-mediated transport [inference]

endosome to lysosome transport

intracellular transport

intracellular protein transport

vacuolar transport

lysosomal transport [inference]

endosome to lysosome transport

organic substance transport [inference]

protein transport [inference]

intracellular protein transport

nitrogen compound transport [inference]

protein transport [inference]

intracellular protein transport

establishment of protein localization [inference]

protein transport [inference]

intracellular protein transport

establishment of localization in cell [inference]

intracellular transport

intracellular protein transport

vacuolar transport

lysosomal transport [inference]

endosome to lysosome transport

cellular localization [inference]

intracellular transport

intracellular protein transport

vacuolar transport

lysosomal transport [inference]

endosome to lysosome transport

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport [inference]

intracellular protein transport

Displaying entries **1 - 5** of 9 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
cytoplasm	IDA	20190753
cytoplasm	IBA
endosome	IDA	23918659
early endosome	IDA	19109425
late endosome	IDA	19109425

GO Hierarchy

cellular component

protein-containing complex [inference]

membrane protein complex [inference]

HOPS complex

vesicle tethering complex

HOPS complex

cellular anatomical entity [inference]

cytoplasm

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

endosome

intracellular membrane-bounded organelle [inference]

Golgi apparatus

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

endosome

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

intracellular vesicle [inference]

cytoplasmic vesicle [inference]

endosome

Displaying **all 2** entries
GO Term	Evidence Code	PMID
protein binding	IPI	16189514 19109425 20190753 22677173 23901104 23918659 25783203 26871637 28017832 29778605 32296183
protein-containing complex binding	IDA	19109425

GO Hierarchy

molecular function

binding [inference]

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Spermatogenesis-defective protein 39

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
vacuolar transport

Displaying 1 entry
InterPro
Spermatogenesis-defective protein 39

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0111354	arthrogryposis, renal dysfunction, and cholestasis 2	Alliance of Genome Resources

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements