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spectrin repeat containing, nuclear envelope 1

Summary

Gene Symbol

Syne1

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

64009

PubChem

64009

Alliance of Genome Resources

MGI:1927152

Annotation

Keyword

Actin-binding
Alternative splicing
Coiled coil
Cytoskeleton
Disulfide bond
Nucleus
Phosphoprotein
Proteomics identification
Reference proteome
Repeat
Spermatogenesis
Transmembrane helix

Proteins

Displaying **all 8** entries
UniProt	Protein Name
Q7TQH5
Q6PI72
Q80T95
A0A1L1STC6
Q6ZWR6	Enaptin KASH domain-containing protein 1 Myocyte nuclear envelope protein 1 Nuclear envelope spectrin repeat protein 1 Synaptic nuclear envelope protein 1
Q6ZWR5
Q0VGB8
Q6ZWR1

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
Golgi organization	ISO
nuclear migration	IMP	17267447
spermatogenesis	IEA
cell differentiation	IEA
muscle cell differentiation	ISO

GO Hierarchy

biological process

cellular process [inference]

cellular developmental process [inference]

cell differentiation

muscle cell differentiation

cellular localization [inference]

intracellular transport [inference]

nuclear migration

maintenance of location in cell [inference]

maintenance of protein location in cell [inference]

maintenance of protein localization in organelle [inference]

maintenance of protein location in nucleus [inference]

nuclear matrix anchoring at nuclear membrane

microtubule organizing center localization [inference]

centrosome localization

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

nucleus organization [inference]

nuclear matrix organization [inference]

nuclear matrix anchoring at nuclear membrane

Golgi organization

reproductive process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

multicellular organismal reproductive process [inference]

gamete generation [inference]

male gamete generation [inference]

spermatogenesis

developmental process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

cellular developmental process [inference]

cell differentiation

muscle cell differentiation

localization [inference]

establishment of localization [inference]

transport [inference]

intracellular transport [inference]

nuclear migration

establishment of localization in cell [inference]

intracellular transport [inference]

nuclear migration

establishment of organelle localization [inference]

nuclear migration

maintenance of location [inference]

maintenance of protein location [inference]

maintenance of protein location in cell [inference]

maintenance of protein localization in organelle [inference]

maintenance of protein location in nucleus [inference]

nuclear matrix anchoring at nuclear membrane

maintenance of location in cell [inference]

maintenance of protein location in cell [inference]

maintenance of protein localization in organelle [inference]

maintenance of protein location in nucleus [inference]

nuclear matrix anchoring at nuclear membrane

organelle localization [inference]

nucleus localization [inference]

nuclear migration

establishment of organelle localization [inference]

nuclear migration

cellular localization [inference]

intracellular transport [inference]

nuclear migration

microtubule organizing center localization [inference]

centrosome localization

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

regulation of cellular component biogenesis [inference]

regulation of cell projection assembly [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of organelle assembly [inference]

regulation of cilium assembly

regulation of cellular component organization [inference]

regulation of cell projection organization [inference]

regulation of cell projection assembly [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of plasma membrane bounded cell projection organization [inference]

regulation of plasma membrane bounded cell projection assembly [inference]

regulation of cilium assembly

regulation of organelle organization [inference]

regulation of organelle assembly [inference]

regulation of cilium assembly

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GO Term	Evidence Code	PMID
P-body	ISO
nuclear envelope	ISA	11792814
nuclear envelope	ISO
nuclear envelope	TAS
nuclear envelope	IDA	10878022 22518138

GO Hierarchy

cellular component

protein-containing complex [inference]

membrane protein complex [inference]

nuclear membrane protein complex [inference]

nuclear membrane microtubule tethering complex [inference]

meiotic nuclear membrane microtubule tethering complex

nuclear protein-containing complex [inference]

nuclear membrane protein complex [inference]

nuclear membrane microtubule tethering complex [inference]

meiotic nuclear membrane microtubule tethering complex

cellular anatomical entity [inference]

membrane

outer membrane [inference]

organelle outer membrane [inference]

nuclear outer membrane

organelle membrane [inference]

nuclear membrane

nuclear outer membrane

bounding membrane of organelle [inference]

organelle outer membrane [inference]

nuclear outer membrane

plasma membrane region [inference]

synaptic membrane [inference]

postsynaptic membrane

sarcomere

envelope [inference]

organelle envelope [inference]

nuclear envelope

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

P-body

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

intracellular non-membrane-bounded organelle [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

P-body

supramolecular complex [inference]

ribonucleoprotein granule [inference]

cytoplasmic ribonucleoprotein granule [inference]

P-body

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GO Term	Evidence Code	PMID
actin binding	ISO
protein binding	IPI	10878022 16079285 21689717 22518138
lamin binding	ISO
enzyme binding	ISO
identical protein binding	ISO

GO Hierarchy

molecular function

binding [inference]

protein binding

lamin binding

cytoskeletal protein binding [inference]

actin binding

actin filament binding

enzyme binding

identical protein binding

protein homodimerization activity

protein dimerization activity [inference]

protein homodimerization activity

protein-containing complex binding [inference]

actin filament binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

alpha-actinin A

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
InterPro
Calponin homology domain

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:11726	Emery-Dreifuss muscular dystrophy	Alliance of Genome Resources

Ortholog

Displaying entries **21 - 30** of 34 in total

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Species	Gene ID	Orthologous MAtrix
Callorhinchus milii	103179228	CALMI17354
Chlorocebus sabaeus	103240740	CHLSB03855
Rhinopithecus roxellana	104657855	RHIRO34831
Macaca nemestrina	105489042	MACNE10500
Mandrillus leucophaeus	105551531	MANLE28204
Cercocebus atys	105588855	CERAT02684
Dipodomys ordii	105993655	DIPOR13147
Sinocyclocheilus grahami	107594101	SINGR36929
Ictalurus punctatus	108269949	ICTPU35606
Cyprinus carpio carpio	109107442	CYPCA86995

GlyTouCan

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UniCarb-DR

LM-GlycoRepo

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Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements