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small nuclear RNA activating complex polypeptide 4

Summary

Gene Symbol

SNAPC4

Organism

Homo sapiens (human)

External Links

NCBI Gene

6621

PubChem

6621

Alliance of Genome Resources

HGNC:11137

Annotation

Keyword

3D-structure
DNA-binding
Disease variant
Intellectual disability
Nucleus
Phosphoprotein
Reference proteome
Repeat
Transcription regulation

Proteins

Displaying 1 entry
UniProt	Protein Name
Q5SXM2	Proximal sequence element-binding transcription factor subunit alpha snRNA-activating protein complex 190 kDa subunit

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
snRNA transcription by RNA polymerase II	IDA	9418884
snRNA transcription by RNA polymerase II	IBA
snRNA transcription by RNA polymerase III	IDA	9418884
snRNA transcription by RNA polymerase III	IBA

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

ncRNA metabolic process [inference]

snRNA metabolic process [inference]

snRNA transcription [inference]

ncRNA transcription [inference]

snRNA transcription [inference]

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription [inference]

transcription by RNA polymerase II [inference]

snRNA transcription by RNA polymerase II

transcription by RNA polymerase III [inference]

snRNA transcription by RNA polymerase III

ncRNA transcription [inference]

snRNA transcription [inference]

Displaying **all 4** entries
GO Term	Evidence Code	PMID
nucleus	IC	11056176
nucleoplasm	TAS
snRNA-activating protein complex	IDA	11056176 9418884
snRNA-activating protein complex	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

transcription regulator complex [inference]

snRNA-activating protein complex

cellular anatomical entity [inference]

nucleoplasm

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
RNA polymerase III general transcription initiation factor activity	IDA	9418884
RNA polymerase III type 3 promoter sequence-specific DNA binding	IBA
DNA binding	IDA	11056176 9418884
protein binding	IPI	11056176 28514442 33961781 36369505

GO Hierarchy

molecular function

binding [inference]

protein binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

RNA polymerase III transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

RNA polymerase III transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

RNA polymerase III transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase III cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase III type 3 promoter sequence-specific DNA binding

general transcription initiation factor activity [inference]

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

transcription

Functional Category

E: Amino acid transport and metabolism
J: Translation, ribosomal structure and biogenesis
T: Signal transduction mechanisms

Displaying **all 3** entries
InterPro
Homeobox-like domain superfamily
Myb domain
SANT/Myb domain

Ortholog

Displaying entries **1 - 10** of 49 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Saccharomyces cerevisiae S288C	4605	SGD:S000001807
Xenopus tropicalis	6621	Xenbase:XB-GENE-1002836
Saccharomyces cerevisiae S288C	17863	SGD:S000001807
Mus musculus	227644		MOUSE35540
Rattus norvegicus	362088		RATNO26285
Pan troglodytes	464918		PANTR45262
Canis lupus familiaris	491251		CANLF19270
Bos taurus	512086		BOVIN03411
Macaca mulatta	721758		MACMU13016
Monodelphis domestica	100020490		MONDO05757

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OrthoDB (Group)

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Acknowledgements