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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
cold shock domain containing E1
Summary
- Gene Symbol
-
- CSDE1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Acetylation
- Alternative splicing
- Cytoplasm
- Isopeptide bond
- Phosphoprotein
- RNA-binding
- Reference proteome
- Repeat
- Ubl conjugation
- Proteins
| UniProt | Protein Name |
|---|---|
| O75534 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| nuclear-transcribed mRNA catabolic process, no-go decay | ||
| male gonad development | ||
| IRES-dependent viral translational initiation | ||
| positive regulation of translation | ||
| stress granule assembly |
GO Hierarchy
biological process
metabolic process [inference]
cellular process [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
negative regulation of metabolic process [inference]
positive regulation of metabolic process [inference]
regulation of catabolic process [inference]
regulation of cellular metabolic process [inference]
regulation of nitrogen compound metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of primary metabolic process [inference]
positive regulation of biological process [inference]
negative regulation of biological process [inference]
regulation of cellular process [inference]
regulation of cellular metabolic process [inference]
negative regulation of cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| Golgi apparatus | ||
| cytoplasmic stress granule | ||
| plasma membrane | ||
| P-body | ||
| mCRD-mediated mRNA stability complex |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| RISC complex binding | ||
| lncRNA binding | ||
| RNA stem-loop binding | ||
| mRNA binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- cold shock domain-containing protein E1
- Functional Category
-
- J: Translation, ribosomal structure and biogenesis
- L: Replication, recombination and repair
- V: Defense mechanisms
| InterPro |
|---|
| Cold shock domain |
| Cold-shock (CSD) domain |
| Cold-shock protein, DNA-binding |
| Nucleic acid-binding, OB-fold |
| SUZ-C domain |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0060041 | autism spectrum disorder |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 38963 | FB:FBgn0263352 | |||
| 117180 | RGD:619726 | RATNO24532 | ||
| 229663 | MGI:92356 | MOUSE38127 | ||
| 336679 | ZFIN:ZDB-GENE-030131-8623 | DANRE43100 | ||
| 457145 | 9598_0:000662 | PANTR21936 | ||
| 475807 | CANLF05275 | |||
| 513993 | BOVIN26199 | |||
| 595092 | Xenbase:XB-GENE-944014 | |||
| 708897 | MACMU24488 | |||
| 735098 | Xenbase:XB-GENE-944019 |
