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GlyTouCan
Glycan Structure Repository
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Glycoconjugate Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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Guidelines
MIRAGE
solute carrier family 6 member 1
Summary
- Gene Symbol
-
- Slc6a1
- Organism
- Rattus norvegicus (Norway rat)
Annotation
- Keyword
-
- 3D-structure
- Cell membrane
- Cell projection
- Direct protein sequencing
- Disulfide bond
- Glycoprotein
- Metal-binding
- Neurotransmitter transport
- Phosphoprotein
- Reference proteome
- Sodium
- Symport
- Synapse
- Transmembrane helix
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| amino acid transmembrane transport | ||
| amino acid transport | ||
| learning | ||
| memory | ||
| associative learning |
GO Hierarchy
biological process
cellular process [inference]
response to stimulus [inference]
localization [inference]
biological regulation [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| plasma membrane | ||
| plasma membrane | ||
| cell surface | ||
| cell surface | ||
| axon |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| amino acid:sodium symporter activity | ||
| gamma-aminobutyric acid:sodium:chloride symporter activity | ||
| gamma-aminobutyric acid:sodium:chloride symporter activity | ||
| gamma-aminobutyric acid:sodium:chloride symporter activity | ||
| protein binding |
GO Hierarchy
molecular function
transporter activity [inference]
transmembrane transporter activity [inference]
organic acid transmembrane transporter activity [inference]
organic anion transmembrane transporter activity [inference]
monoatomic ion transmembrane transporter activity [inference]
inorganic molecular entity transmembrane transporter activity [inference]
active transmembrane transporter activity [inference]
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- transporter
- Functional Category
-
- E: Amino acid transport and metabolism
- K: Transcription
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| symporter activity |
Alliance of Genome Resources
- Expression
| Location | References |
|---|---|
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:2316 | brain ischemia |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 6529 | Xenbase:XB-GENE-5944458 | HUMAN68493 | |
| 14412 | WB:WBGene00004910 | ||
| 79212 | Xenbase:XB-GENE-5944458 | ||
| 171163 | WB:WBGene00004910 | ||
| 191770 | Xenbase:XB-GENE-5944458 | ||
| 232333 | Xenbase:XB-GENE-5944458 | MOUSE50262 | |
| 407118 | BOVIN18026 | ||
| 460170 | PANTR30430 | ||
| 484655 | CANLF07278 | ||
| 692318 | DANRE24009 |
