GlyCosmos Portal

Submissions

yrdC N6-threonylcarbamoyltransferase domain containing

Summary

Gene Symbol

YRDC

Organism

Homo sapiens (human)

External Links

NCBI Gene

79693

PubChem

79693

Alliance of Genome Resources

HGNC:28905

Annotation

Keyword

Cell membrane
Cytoplasm
Disease variant
Epilepsy
Intellectual disability
Mitochondrion
Phosphoprotein
Reference proteome
Transferase
Transit peptide

Proteins

Displaying 1 entry
UniProt	Protein Name
Q86U90	Dopamine receptor-interacting protein 3 Ischemia/reperfusion-inducible protein homolog

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 3** entries
GO Term	Evidence Code	PMID
negative regulation of transport	IDA	2675563
tRNA threonylcarbamoyladenosine modification	IDA	29760464 31481669 34545459
regulation of translational fidelity	IBA

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule modification [inference]

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA processing [inference]

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

RNA modification [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA metabolic process [inference]

tRNA metabolic process [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

tRNA threonylcarbamoyladenosine metabolic process [inference]

tRNA threonylcarbamoyladenosine modification

ncRNA processing [inference]

tRNA processing [inference]

tRNA modification [inference]

tRNA threonylcarbamoyladenosine modification

biological regulation [inference]

regulation of biological process [inference]

regulation of localization [inference]

regulation of transport [inference]

negative regulation of transport

negative regulation of biological process [inference]

negative regulation of transport

regulation of biological quality [inference]

regulation of translational fidelity

Displaying **all 3** entries
GO Term	Evidence Code	PMID
plasma membrane	IEA
mitochondrion	HTP IDA	29760464 34800366
cytoplasm	IBA IDA	29760464

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

membrane [inference]

plasma membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

mitochondrion

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

mitochondrion

Displaying **all 5** entries
GO Term	Evidence Code	PMID
protein binding	IPI	32814053
double-stranded RNA binding	IEA
tRNA binding	IBA
L-threonylcarbamoyladenylate synthase	IDA	29760464
nucleotidyltransferase activity	IBA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring phosphorus-containing groups [inference]

nucleotidyltransferase activity

L-threonylcarbamoyladenylate synthase

binding [inference]

protein binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

RNA binding [inference]

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

protein

Functional Category

C: Energy production and conversion
H: Coenzyme transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
acetate transmembrane transporter activity

Displaying 1 entry
InterPro
Acetate transporter GPR1/Ato2/SatP-like

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:0080694	Galloway-Mowat syndrome	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 58 in total

1

2

3

4

5

6

Next ›

Last »
Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Caenorhabditis elegans	174981		WB:WBGene00012997
Mus musculus	230734		MGI:2387201	MOUSE42082
Rattus norvegicus	319113		RGD:708492	RATNO34829
Xenopus laevis	398509		Xenbase:XB-GENE-5744347
Pan troglodytes	456764	9598_0:000475		PANTR20688
Xenopus laevis	496333		Xenbase:XB-GENE-17345982
Bos taurus	512062			BOVIN27272
Xenopus tropicalis	548554		Xenbase:XB-GENE-5744243
Danio rerio	797343		ZFIN:ZDB-GENE-070410-65
Saccharomyces cerevisiae S288C	852707		SGD:S000003137