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chromodomain helicase DNA binding protein 9

Summary

Gene Symbol

CHD9

Organism

Homo sapiens (human)

External Links

NCBI Gene

80205

PubChem

80205

Alliance of Genome Resources

HGNC:25701

Annotation

Keyword

Acetylation
Alternative splicing
Chromatin regulator
Cytoplasm
DNA-binding
Helicase
Isopeptide bond
Nucleus
Phosphoprotein
Reference proteome
Repeat
Transcription regulation
Ubl conjugation

Proteins

Displaying 1 entry
UniProt	Protein Name
Q3L8U1	ATP-dependent helicase CHD9 Chromatin-related mesenchymal modulator Chromatin-remodeling factor CHROM1 Kismet homolog 2 PPAR-alpha-interacting complex protein 320 kDa Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein

Annotation information from UniProt.

Gene Ontology (GO)

Displaying 1 entry
GO Term	Evidence Code	PMID
chromatin remodeling	IEA

GO Hierarchy

biological process

cellular process [inference]

cellular component organization or biogenesis [inference]

cellular component organization [inference]

protein-containing complex organization [inference]

protein-DNA complex organization [inference]

chromatin organization [inference]

chromatin remodeling

Displaying **all 2** entries
GO Term	Evidence Code	PMID
nucleoplasm	IDA TAS
cytosol	IDA

GO Hierarchy

cellular component

cellular anatomical entity [inference]

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GO Term	Evidence Code	PMID
protein binding	IPI	16554032
DNA binding	IEA
ATP-dependent chromatin remodeler activity	IEA
helicase activity	IEA
ATP hydrolysis activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on acid anhydrides [inference]

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [inference]

pyrophosphatase activity [inference]

ribonucleoside triphosphate phosphatase activity [inference]

ATP hydrolysis activity

catalytic activity, acting on a nucleic acid [inference]

helicase activity

catalytic activity, acting on DNA [inference]

ATP-dependent activity, acting on DNA [inference]

ATP-dependent chromatin remodeler activity

binding [inference]

protein binding

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ion binding [inference]

anion binding [inference]

purine ribonucleoside triphosphate binding [inference]

ATP binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding

nucleoside phosphate binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleoside triphosphate binding [inference]

ATP binding

carbohydrate derivative binding [inference]

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ATP-dependent activity [inference]

helicase activity

ATP-dependent activity, acting on DNA [inference]

ATP-dependent chromatin remodeler activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

CHROMODOMAIN HELICASE DNA BINDING

Functional Category

I: Lipid transport and metabolism
K: Transcription
T: Signal transduction mechanisms

Displaying **all 5** entries
Gene Ontology
ATP binding
chromatin binding
histone binding
hydrolase activity
nucleotide binding

Displaying **all 6** entries
InterPro
Helicase superfamily 1/2, ATP-binding domain
Helicase, C-terminal domain-like
P-loop containing nucleoside triphosphate hydrolase
SNF2, N-terminal
SNF2-like, N-terminal domain superfamily
SNF2/RAD5-like, C-terminal helicase domain

Disease

Disease Ontology

Displaying **all 3** entries
DO ID	Disease Name	Source
DOID:0050834	CHARGE syndrome	Alliance of Genome Resources
DOID:0060041	autism spectrum disorder	Alliance of Genome Resources
DOID:1682	congenital heart disease	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 92 in total

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Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Drosophila melanogaster	33185		FB:FBgn0266557
Mus musculus	109151		MGI:1924001	MOUSE59085
Caenorhabditis elegans	172079		WB:WBGene00007053
Rattus norvegicus	307726		RGD:1306795	RATNO15340
Pan troglodytes	454088	9598_0:004235		PANTR12351
Canis lupus familiaris	478128			CANLF06849
Bos taurus	539275			BOVIN10429
Danio rerio	572355		ZFIN:ZDB-GENE-030131-497	DANRE41311
Macaca mulatta	696367			MACMU25839
Xenopus tropicalis	733830		Xenbase:XB-GENE-1217623

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements