GlyCosmos Portal

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GO Term	Evidence Code	PMID
5'-deoxyribose-5-phosphate lyase activity	IDA	19465398
RNA polymerase II-specific DNA-binding transcription factor binding	IPI	14645522
C2H2 zinc finger domain binding	IMP	14645522

GO Hierarchy

molecular function

catalytic activity [inference]

lyase activity [inference]

carbon-oxygen lyase activity [inference]

5'-deoxyribose-5-phosphate lyase activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on DNA [inference]

binding [inference]

protein binding

transcription factor binding [inference]

DNA-binding transcription factor binding [inference]

RNA polymerase II-specific DNA-binding transcription factor binding

protein domain specific binding [inference]

SMAD binding

protein-containing complex binding [inference]

chromatin binding [inference]

chromatin DNA binding [inference]

nucleosomal DNA binding

nucleosome binding [inference]

nucleosomal DNA binding

organic cyclic compound binding [inference]

nucleic acid binding

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

DNA binding [inference]

DNA secondary structure binding [inference]

minor groove of adenine-thymine-rich DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

DNA binding, bending

chromatin DNA binding [inference]

nucleosomal DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding [inference]

cAMP response element binding

transcription regulator activity [inference]

transcription coregulator activity

transcription corepressor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

high mobility group protein HMGI-C isoform d

Functional Category

E: Amino acid transport and metabolism
I: Lipid transport and metabolism
K: Transcription

Displaying **all 4** entries
Gene Ontology
actin filament organization
actin monomer binding
regulation of cell migration
sequestering of actin monomers

Disease

Disease Ontology

Displaying **all 4** entries
DO ID	Disease Name	Source
DOID:127	leiomyoma	Alliance of Genome Resources
DOID:14681	Silver-Russell syndrome	Alliance of Genome Resources
DOID:2394	ovarian cancer	Alliance of Genome Resources
DOID:3315	lipoma	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 30 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	8091	Xenbase:XB-GENE-6258173
Mus musculus	15364		MOUSE00498
Rattus norvegicus	84017		RATNO38031
Danio rerio	324428		DANRE33887
Pan troglodytes	744431		PANTR05355
Bos taurus	100297155		BOVIN29485
Callithrix jacchus	100403708		CALJA45980
Pongo abelii	100436170		PONAB04803
Sus scrofa	100513206		PIGXX25759
Taeniopygia guttata	101233643		TAEGU08783

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements