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vimentin
Summary
- Gene Symbol
-
- Vim
- Organism
- Rattus norvegicus (Norway rat)
Annotation
- Keyword
-
- Acetylation
- Cell membrane
- Coiled coil
- Cytoskeleton
- Direct protein sequencing
- Glycoprotein
- Intermediate filament
- Isopeptide bond
- Nucleus
- Phosphoprotein
- Reference proteome
- S-nitrosylation
- Ubl conjugation
- Proteins
| UniProt | Protein Name |
|---|---|
| P31000 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| cellular response to fibroblast growth factor stimulus | ||
| regulation of mRNA stability | ||
| positive regulation of collagen biosynthetic process | ||
| intermediate filament-based process | ||
| cellular response to muramyl dipeptide |
GO Hierarchy
biological process
cellular process [inference]
response to stimulus [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of metabolic process [inference]
positive regulation of biological process [inference]
regulation of developmental process [inference]
regulation of cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| intermediate filament cytoskeleton | ||
| peroxisome | ||
| type III intermediate filament | ||
| cell leading edge | ||
| plasma membrane |
| GO Term | Evidence Code | PMID |
|---|---|---|
| kinase binding | ||
| protein binding | ||
| protein tyrosine kinase binding | ||
| double-stranded RNA binding | ||
| structural constituent of eye lens |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- vimentin
- Functional Category
-
- J: Translation, ribosomal structure and biogenesis
- K: Transcription
| Gene Ontology |
|---|
| intermediate filament organization |
| structural constituent of cytoskeleton |
| InterPro |
|---|
| Intermediate filament head, DNA-binding domain |
| Intermediate filament protein, conserved site |
| Intermediate filament, rod domain |
Alliance of Genome Resources
- Expression
| Location | References |
|---|---|
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110248 | cataract 30 | |
| DOID:10652 | Alzheimer's disease | |
| DOID:12140 | Chagas disease | |
| DOID:12894 | Sjogren's syndrome | |
| DOID:13241 | Behcet's disease | |
| DOID:1936 | atherosclerosis | |
| DOID:2527 | nephrosis | |
| DOID:3393 | coronary artery disease | |
| DOID:3526 | cerebral infarction | |
| DOID:6432 | pulmonary hypertension |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 7431 | HGNC:12692 | HUMAN00425 | ||
| 22352 | 10090_1:00098f | MGI:98932 | MOUSE32470 | |
| 140599 | ZFIN:ZDB-GENE-011212-3 | DANRE26261 | ||
| 280955 | BOVIN04471 | |||
| 393746 | ZFIN:ZDB-GENE-040426-1743 | |||
| 445691 | CIOIN10748 | |||
| 477991 | CANLF06531 | |||
| 493952 | PANTR00246 | |||
| 496727 | Xenbase:XB-GENE-493024 | |||
| 607206 | CANLF06531 |
