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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
AT-rich interaction domain 1A
Summary
- Gene Symbol
-
- ARID1A
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Acetylation
- Alternative splicing
- Chromatin regulator
- DNA-binding
- Direct protein sequencing
- Intellectual disability
- Methylation
- Neurogenesis
- Nucleus
- Phosphoprotein
- Reference proteome
- Transcription regulation
- Proteins
| UniProt | Protein Name |
|---|---|
| O14497 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| regulation of mitotic metaphase/anaphase transition | ||
| positive regulation of stem cell population maintenance | ||
| regulation of G0 to G1 transition | ||
| regulation of G1/S transition of mitotic cell cycle | ||
| positive regulation of cell differentiation |
GO Hierarchy
biological process
biological regulation [inference]
regulation of biological process [inference]
regulation of immune system process [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
positive regulation of metabolic process [inference]
regulation of cellular metabolic process [inference]
regulation of nitrogen compound metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of primary metabolic process [inference]
positive regulation of biological process [inference]
regulation of developmental process [inference]
regulation of cellular process [inference]
regulation of cellular metabolic process [inference]
regulation of cell differentiation [inference]
positive regulation of cellular process [inference]
regulation of cell activation [inference]
regulation of cell cycle [inference]
regulation of multicellular organismal process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| bBAF complex | ||
| brahma complex | ||
| SWI/SNF complex | ||
| npBAF complex | ||
| nucleoplasm |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| nucleosome binding | ||
| DNA binding | ||
| nuclear receptor binding | ||
| transcription coactivator activity |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Trithorax group protein osa
- Functional Category
-
- G: Carbohydrate transport and metabolism
- K: Transcription
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| nucleosome binding |
| InterPro |
|---|
| ARID DNA-binding domain superfamily |
| ARID DNA-binding domain |
| SWI/SNF-like complex subunit BAF250, C-terminal |
| SWI/SNF-like complex subunit BAF250/Osa |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050934 | ovarian clear cell carcinoma | |
| DOID:0070042 | Coffin-Siris syndrome 1 | |
| DOID:0070044 | Coffin-Siris syndrome 2 | |
| DOID:10534 | stomach cancer | |
| DOID:10591 | pre-eclampsia | |
| DOID:1574 | alcohol use disorder | |
| DOID:1612 | breast cancer | |
| DOID:162 | cancer | |
| DOID:1925 | Coffin-Siris syndrome | |
| DOID:219 | colon cancer |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 42130 | FB:FBgn0261885 | |||
| 93760 | MGI:1935147 | MOUSE40525 | ||
| 297867 | RGD:1310500 | RATNO33203 | ||
| 456665 | 9598_0:0000c1 | |||
| 487352 | CANLF06981 | |||
| 540181 | BOVIN25113 | |||
| 568161 | ZFIN:ZDB-GENE-030131-5725 | DANRE15411 | ||
| 719949 | MACMU25162 | |||
| 3565337 | WB:WBGene00002717 | |||
| 100071048 | HORSE27161 |
