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Nucleotide-diphospho-sugar transferases superfamily protein

Summary

Gene Symbol

IRX9-L

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 839652
KEGG Gene ID: ath:AT1G27600
PubChem: 839652

Annotation

Keyword

Cell wall biogenesis/degradation
Glycoprotein
Glycosyltransferase
Golgi apparatus
Manganese
Metal-binding
Reference proteome
Signal-anchor
Transferase
Transmembrane helix

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A0A384KPX8
W8PW09
Q9SXC4	Protein IRREGULAR XYLEM 9 homolog Xylan xylosyltransferase IRX9H

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
pollen exine formation	IMP	21849515
plant-type secondary cell wall biogenesis	IMP	20335400
cell wall organization
glucuronoxylan biosynthetic process	IMP	20335400
xylan biosynthetic process	IMP	26043357

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xylan metabolic process [inference]

glucuronoxylan metabolic process [inference]

glucuronoxylan biosynthetic process

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xylan metabolic process [inference]

glucuronoxylan metabolic process [inference]

glucuronoxylan biosynthetic process

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xylan metabolic process [inference]

glucuronoxylan metabolic process [inference]

glucuronoxylan biosynthetic process

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall macromolecule metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xylan metabolic process [inference]

glucuronoxylan metabolic process [inference]

glucuronoxylan biosynthetic process

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cellular process [inference]

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

cell wall polysaccharide biosynthetic process [inference]

xylan biosynthetic process

glucuronoxylan biosynthetic process

cell wall organization or biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

cell wall organization

plant-type cell wall organization or biogenesis [inference]

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

cellular component assembly involved in morphogenesis [inference]

pollen wall assembly [inference]

pollen exine formation

external encapsulating structure organization [inference]

pollen wall assembly [inference]

pollen exine formation

cell wall organization

cellular component biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

developmental process [inference]

anatomical structure formation involved in morphogenesis [inference]

cellular component assembly involved in morphogenesis [inference]

pollen wall assembly [inference]

pollen exine formation

Displaying **all 2** entries
GO Term	Evidence Code	PMID
Golgi apparatus	IDA	20335400
Golgi membrane

GO Hierarchy

cellular component

cellular anatomical entity [inference]

membrane [inference]

organelle membrane [inference]

bounding membrane of organelle [inference]

Golgi membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

Displaying **all 3** entries
GO Term	Evidence Code	PMID
xylosyltransferase activity	IMP	20335400
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEA
glycosyltransferase activity	ISS

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity

UDP-glycosyltransferase activity [inference]

glucuronosyltransferase activity [inference]

galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity

hexosyltransferase activity [inference]

glucuronosyltransferase activity [inference]

galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity

pentosyltransferase activity [inference]

xylosyltransferase activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I

Functional Category

M: Cell wall/membrane/envelope biogenesis
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 4** entries
Gene Ontology
chondroitin sulfate proteoglycan biosynthetic process
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
metal ion binding
transferase activity

Displaying **all 2** entries
InterPro
Glycosyl transferase, family 43
Nucleotide-diphospho-sugar transferases

KEGG BRITE Database

Orthology

K20869

Name

putative beta-1,4-xylosyltransferase IRX9 [EC:2.4.2.-]

References

Ortholog

Displaying entries **1 - 10** of 17 in total

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Species	Gene ID	OrthoDB
Arabidopsis lyrata subsp. lyrata	9326796	81972_0:00029b
Capsella rubella	17899385	81985_0:0009ed
Eutrema salsugineum	18992304	72664_0:004e40
Brassica rapa	103829053	3711_0:007318
Brassica rapa	103835386	3711_0:007e65
Camelina sativa	104741366	90675_0:00dd57
Camelina sativa	104757088	90675_0:010772
Camelina sativa	104776812	90675_0:002acd
Tarenaya hassleriana	104806919	28532_0:0007b7
Tarenaya hassleriana	104825809	28532_0:004f16