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rDNA-binding RNA polymerase I transcriptional factor

Summary

Gene Symbol

RRN3

Organism

Saccharomyces cerevisiae S288C

External Links

NCBI Gene

853734

PubChem

853734

Alliance of Genome Resources

SGD:S000001608

Annotation

Keyword

3D-structure
Nucleus
Reference proteome
Transcription regulation

Proteins

Displaying 1 entry
UniProt	Protein Name
P36070

Annotation information from UniProt.

Gene Ontology (GO)

Displaying 1 entry
GO Term	Evidence Code	PMID
transcription initiation at RNA polymerase I promoter	IBA IEA IMP	8670901

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

DNA-templated transcription initiation [inference]

transcription initiation at RNA polymerase I promoter

Displaying **all 2** entries
GO Term	Evidence Code	PMID
nucleus	IBA IEA
nucleolus	IDA	19416370

GO Hierarchy

cellular component

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

nucleolus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular non-membrane-bounded organelle [inference]

nucleolus

Displaying **all 4** entries
GO Term	Evidence Code	PMID
RNA polymerase I core binding	IBA IDA IPI	11032814
rDNA binding	IDA	23393135
RNA polymerase I general transcription initiation factor binding	IDA IPI	11032814
RNA polymerase I general transcription initiation factor activity	IBA IDA IEA IGI IPI	11032814

GO Hierarchy

molecular function

binding [inference]

protein binding [inference]

transcription factor binding [inference]

general transcription initiation factor binding [inference]

RNA polymerase I general transcription initiation factor binding

enzyme binding [inference]

RNA polymerase binding [inference]

RNA polymerase core enzyme binding [inference]

RNA polymerase I core binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding [inference]

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

rDNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

rDNA binding

general transcription initiation factor activity [inference]

RNA polymerase I general transcription initiation factor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

RRN3

Functional Category

E: Amino acid transport and metabolism
M: Cell wall/membrane/envelope biogenesis
O: Posttranslational modification, protein turnover, chaperones

Displaying **all 2** entries
Gene Ontology
RNA polymerase I core binding
RNA polymerase I general transcription initiation factor activity

Displaying 1 entry
InterPro
RNA polymerase I specific transcription initiation factor RRN3

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
nucleolus	PMID:19416370

Disease

Disease Ontology

Displaying 1 entry
DO ID	Disease Name	Source
DOID:14330	Parkinson's disease	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 31 in total

1

2

3

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Next ›

Last »
Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Drosophila melanogaster	35454		FB:FBgn0032988
Homo sapiens	54700		HGNC:30346
Mus musculus	106298		MGI:1925255
Caenorhabditis elegans	175517		WB:WBGene00007980
Rattus norvegicus	304714		RGD:1305001
Danio rerio	558718		ZFIN:ZDB-GENE-080225-1
Homo sapiens	653390		HGNC:37619
Homo sapiens	730092		HGNC:30548
Kluyveromyces lactis	2897280	28985_0:0002a4
Eremothecium gossypii ATCC 10895	4619012	284811_0:00032a

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Last updated: December 9, 2024