GlyCosmos Portal

Submissions

3-deoxy-D-manno-octulosonate 8-phosphate synthase

Summary

Gene Symbol

kdsA

Organism

Escherichia coli str. K-12 substr. MG1655

External Links

NCBI Gene: 945785
PubChem: 945785

Annotation

Keyword

3D-structure
Cytoplasm
Direct protein sequencing
Lipopolysaccharide biosynthesis
Reference proteome
Transferase

Proteins

Displaying 1 entry
UniProt	Protein Name
P0A715	3-deoxy-D-manno-octulosonic acid 8-phosphate synthase KDO-8-phosphate synthase Phospho-2-dehydro-3-deoxyoctonate aldolase

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 3** entries
GO Term	Evidence Code	PMID
biosynthetic process	IEA
keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	IBA IDA IEA	8223657
lipopolysaccharide biosynthetic process	IEA

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

small molecule biosynthetic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic substance biosynthetic process [inference]

lipid biosynthetic process [inference]

lipopolysaccharide biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

carbohydrate derivative biosynthetic process [inference]

lipopolysaccharide biosynthetic process

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

lipid metabolic process [inference]

lipid biosynthetic process [inference]

lipopolysaccharide biosynthetic process

liposaccharide metabolic process [inference]

lipopolysaccharide metabolic process [inference]

lipopolysaccharide biosynthetic process

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

small molecule biosynthetic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

lipid metabolic process [inference]

lipid biosynthetic process [inference]

lipopolysaccharide biosynthetic process

liposaccharide metabolic process [inference]

lipopolysaccharide metabolic process [inference]

lipopolysaccharide biosynthetic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

lipopolysaccharide metabolic process [inference]

lipopolysaccharide biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

carbohydrate derivative metabolic process [inference]

carbohydrate derivative biosynthetic process [inference]

lipopolysaccharide biosynthetic process

liposaccharide metabolic process [inference]

lipopolysaccharide metabolic process [inference]

lipopolysaccharide biosynthetic process

organic substance biosynthetic process [inference]

lipid biosynthetic process [inference]

lipopolysaccharide biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

monosaccharide biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

carbohydrate derivative biosynthetic process [inference]

lipopolysaccharide biosynthetic process

cellular process [inference]

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

keto-3-deoxy-D-manno-octulosonic acid metabolic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

lipopolysaccharide biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

keto-3-deoxy-D-manno-octulosonic acid biosynthetic process

Displaying **all 3** entries
GO Term	Evidence Code	PMID
cytosol	HDA IBA IDA	15911532 16858726 18304323
cytoplasm	IEA
protein-containing complex	IDA	10734095

GO Hierarchy

cellular component

protein-containing complex

cellular anatomical entity [inference]

Displaying **all 3** entries
GO Term	Evidence Code	PMID
transferase activity	IEA
3-deoxy-8-phosphooctulonate synthase activity	IBA IDA IEA	8223657
identical protein binding	IDA	10734095

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity

transferase activity, transferring alkyl or aryl (other than methyl) groups [inference]

3-deoxy-8-phosphooctulonate synthase activity

binding [inference]

protein binding [inference]

identical protein binding

Gene Ontology information from NCBI Gene and UniProt.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

All Resources

Other Information

Tools

Search Tools

Summary

External Links

Annotation

International Collaboration

Acknowledgements