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formate hydrogenlyase subunit HycF

Summary

Gene Symbol

hycF

Organism

Escherichia coli str. K-12 substr. MG1655

External Links

NCBI Gene: 947048
PubChem: 947048

Annotation

Keyword

3D-structure
4Fe-4S
Electron transport
Reference proteome
Repeat

Proteins

Displaying 1 entry
UniProt	Protein Name
P16432	Hydrogenase-3 component F

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
glucose catabolic process	IDA	25157147
anaerobic respiration	IDA	25157147
aerobic respiration	IBA
anaerobic electron transport chain	IDA	25157147
formate oxidation	IDA	25157147

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

formate metabolic process [inference]

formate oxidation

catabolic process [inference]

small molecule catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

cellular metabolic process [inference]

organic acid metabolic process [inference]

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

formate metabolic process [inference]

formate oxidation

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

cellular respiration [inference]

electron transport chain [inference]

respiratory electron transport chain [inference]

anaerobic electron transport chain

primary metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process [inference]

glucose catabolic process

hexose catabolic process [inference]

glucose catabolic process

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process [inference]

glucose catabolic process

hexose catabolic process [inference]

glucose catabolic process

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

organic acid metabolic process [inference]

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

formate metabolic process [inference]

formate oxidation

small molecule catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process [inference]

glucose catabolic process

hexose catabolic process [inference]

glucose catabolic process

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

organic acid metabolic process [inference]

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

formate metabolic process [inference]

formate oxidation

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

hexose catabolic process [inference]

glucose catabolic process

cellular process [inference]

cellular metabolic process [inference]

organic acid metabolic process [inference]

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

formate metabolic process [inference]

formate oxidation

generation of precursor metabolites and energy [inference]

energy derivation by oxidation of organic compounds [inference]

cellular respiration [inference]

electron transport chain [inference]

respiratory electron transport chain [inference]

anaerobic electron transport chain

Displaying **all 3** entries
GO Term	Evidence Code	PMID
formate dehydrogenase complex	IPI	25157147
membrane	IEA
plasma membrane respiratory chain complex I

GO Hierarchy

cellular component

protein-containing complex [inference]

membrane protein complex [inference]

NADH dehydrogenase complex [inference]

respiratory chain complex I [inference]

plasma membrane respiratory chain complex I

plasma membrane protein complex [inference]

plasma membrane respiratory chain complex I

respiratory chain complex [inference]

respiratory chain complex I [inference]

plasma membrane respiratory chain complex I

transmembrane transporter complex [inference]

respiratory chain complex I [inference]

plasma membrane respiratory chain complex I

catalytic complex [inference]

oxidoreductase complex [inference]

formate dehydrogenase complex

NADH dehydrogenase complex [inference]

respiratory chain complex I [inference]

plasma membrane respiratory chain complex I

transporter complex [inference]

transmembrane transporter complex [inference]

respiratory chain complex I [inference]

plasma membrane respiratory chain complex I

cellular anatomical entity [inference]

membrane

Displaying **all 4** entries
GO Term	Evidence Code	PMID
NADH dehydrogenase activity	IBA
4 iron, 4 sulfur cluster binding	IEA RCA	2187144
oxidoreductase activity, acting on NAD(P)H	IEA
metal ion binding	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

oxidoreductase activity [inference]

oxidoreductase activity, acting on NAD(P)H

NADH dehydrogenase activity

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding

metal cluster binding [inference]

iron-sulfur cluster binding [inference]

4 iron, 4 sulfur cluster binding

Gene Ontology information from NCBI Gene and UniProt.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

GlyCosmos Portal v4.0.0

Last updated: August 19, 2024

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