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GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
G42052HH
Summary
- GlyTouCan ID
-
G42052HH
- IUPAC Condensed
- Neu5Gc(a2-3)[Gal(b1-4)]Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-2)Man(a1-?)[Gal(b1-4)Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-2)Man(a1-?)]Man(b1-6)GlcNAc(b1-4)GlcNAc(?1-
- Motifs
- Lewis x Lex N-acetyllactosamine SSEA-1 Type 2 LN
- Subsumption Level
- Linkage defined saccharide
- Monoisotopic Mass
- 2563.9
Organisms
| Organisms | Evidence |
|---|---|
| Danio rerio (zebrafish) |
Taxonomic Hierarchy
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- gill
- ovary
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-lgal-HEX-1:5|6:d 10b:b-dgal-HEX-1:5 11b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 12s:n-glycolyl 13b:b-dgal-HEX-1:5 14b:a-dman-HEX-1:5 15b:b-dglc-HEX-1:5 16s:n-acetyl 17b:a-lgal-HEX-1:5|6:d 18b:b-dgal-HEX-1:5 19b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(6+1)5d 5:5o(-1+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:7o(4+1)10d 10:10o(3+2)11d 11:11d(5+1)12n 12:10o(4+1)13d 13:5o(-1+1)14d 14:14o(2+1)15d 15:15d(2+1)16n 16:15o(3+1)17d 17:15o(4+1)18d 18:18o(4+1)19d
- WURCS
- WURCS=2.0/7,14,13/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCCO/3=O]/1-2-3-4-2-5-6-7-6-4-2-5-6-6/a4-b1_b6-c1_d2-e1_e3-f1_e4-g1_g3-h2_g4-i1_j2-k1_k3-l1_k4-m1_m4-n1_c?-d1_c?-j1
