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GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
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Glycan Converters
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LM-GlycomeAtlas
GALAXY
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Guidelines
MIRAGE
G81649FJ
Summary
- GlyTouCan ID
-
G81649FJ
- IUPAC Condensed
- Neu5Ac(a2-3)[Gal(b1-4)]Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-2)Man(a1-3)[Neu5Ac(a2-3)[Gal(b1-4)]Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-2)[Neu5Ac(a2-3)[Gal(b1-4)]Gal(b1-4)[Fuc(a1-3)]GlcNAc(b1-4)]Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(?1-
- Motifs
- N-Glycan complex Sialyl Lewis x Slex
- Subsumption Level
- Linkage-defined saccharide
- Monoisotopic Mass
- 3803.34
3D Structures
- GlycoShape
- G81649FJ
Organisms
| Organisms | Evidence |
|---|---|
| Danio rerio (zebrafish) |
Taxonomic Hierarchy
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- gill
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-lgal-HEX-1:5|6:d 10b:b-dgal-HEX-1:5 11b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 12s:n-acetyl 13b:b-dgal-HEX-1:5 14b:a-dman-HEX-1:5 15b:b-dglc-HEX-1:5 16s:n-acetyl 17b:a-lgal-HEX-1:5|6:d 18b:b-dgal-HEX-1:5 19b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl 21b:b-dgal-HEX-1:5 22b:b-dglc-HEX-1:5 23s:n-acetyl 24b:a-lgal-HEX-1:5|6:d 25b:b-dgal-HEX-1:5 26b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 27s:n-acetyl 28b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:7o(4+1)10d 10:10o(3+2)11d 11:11d(5+1)12n 12:10o(4+1)13d 13:5o(6+1)14d 14:14o(2+1)15d 15:15d(2+1)16n 16:15o(3+1)17d 17:15o(4+1)18d 18:18o(3+2)19d 19:19d(5+1)20n 20:18o(4+1)21d 21:14o(4+1)22d 22:22d(2+1)23n 23:22o(3+1)24d 24:22o(4+1)25d 25:25o(3+2)26d 26:26d(5+1)27n 27:25o(4+1)28d
- WURCS
- WURCS=2.0/7,20,19/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-4-2-5-6-7-6-4-2-5-6-7-6-2-5-6-7-6/a4-b1_b4-c1_c3-d1_c6-j1_d2-e1_e3-f1_e4-g1_g3-h2_g4-i1_j2-k1_j4-p1_k3-l1_k4-m1_m3-n2_m4-o1_p3-q1_p4-r1_r3-s2_r4-t1
