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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | December 18, 2024 |
| PDB ID | UniProt ID | Title | Descriptor ▼ |
|---|---|---|---|
| 6Q6X | A0A069Q9V4 | Structure of Fucosylated D-antimicrobial peptide SB6 in complex with the Fucose-binding lectin PA-IIL at 1.525 Angstrom resolution | Fucose-binding lectin, SB6 |
| 6Q6X | 6Q6X | Structure of Fucosylated D-antimicrobial peptide SB6 in complex with the Fucose-binding lectin PA-IIL at 1.525 Angstrom resolution | Fucose-binding lectin, SB6 |
| 5C2G | 5C2G | GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (CABP-bound). | Form II RubisCO |
| 5VXX | P02974 | Cryo-EM reconstruction of Neisseria gonorrhoeae Type IV pilus | Fimbrial protein |
| 2HIL | P02974 | Structure of the Neisseria gonorrhoeae Type IV pilus filament from x-ray crystallography and electron cryomicroscopy | Fimbrial protein |
| 1N73 | P02674 | Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE | Fibrin alpha-1 chain/Fibrin beta chain/Fibrin gamma chain/Fibrin peptide ligand: Gly-his-Arg-Pro-amide |
| 1N73 | P02678 | Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE | Fibrin alpha-1 chain/Fibrin beta chain/Fibrin gamma chain/Fibrin peptide ligand: Gly-his-Arg-Pro-amide |
| 1N73 | P04115 | Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE | Fibrin alpha-1 chain/Fibrin beta chain/Fibrin gamma chain/Fibrin peptide ligand: Gly-his-Arg-Pro-amide |
| 1N73 | 1N73 | Fibrin D-Dimer, Lamprey complexed with the PEPTIDE LIGAND: GLY-HIS-ARG-PRO-AMIDE | Fibrin alpha-1 chain/Fibrin beta chain/Fibrin gamma chain/Fibrin peptide ligand: Gly-his-Arg-Pro-amide |
| 3SGK | P01857 | Unique carbohydrate/carbohydrate interactions are required for high affinity binding of FcgIII and antibodies lacking core fucose | Fc fragment, human Fcg3a receptor |
| 3SGK | P08637 | Unique carbohydrate/carbohydrate interactions are required for high affinity binding of FcgIII and antibodies lacking core fucose | Fc fragment, human Fcg3a receptor |
| 4AGI | Q4WW81 | Crystal Structure of Fucose binding lectin from Aspergillus Fumigatus (AFL) in complex with seleno fucoside. | FUCOSE-SPECIFIC LECTIN FLEA |
| 1FPG | P00636 | STRUCTURAL ASPECTS OF THE ALLOSTERIC INHIBITION OF FRUCTOSE-1,6-BISPHOSPHATASE BY AMP: THE BINDING OF BOTH THE SUBSTRATE ANALOGUE 2,5-ANHYDRO-D-GLUCITOL-1,6-BISPHOSPHATE AND CATALYTIC METAL IONS MONITORED BY X-RAY CRYSTALLOGRAPHY | FRUCTOSE-1,6-BISPHOSPHATASE (D-FRUCTOSE-1,6-BISPHOSPHATE 1-PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AMP, 2,5-ANHYDRO-D-GLUCITOL-1,6-BISPHOSPHATE, AND MN2+ (CONCENTRATION OF 300 MICROMOLAR) |
| 1FBP | P00636 | CRYSTAL STRUCTURE OF FRUCTOSE-1,6-BISPHOSPHATASE COMPLEXED WITH FRUCTOSE 6-PHOSPHATE, AMP, AND MAGNESIUM | FRUCTOSE-1,6-BISPHOSPHATASE (D-FRUCTOSE-1,6-BISPHOSPHATE 1-PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEX WITH ADENOSINE MONOPHOSPHATE, FRUCTOSE 6-PHOSPHATE, AND MAGNESIUM |
| 1FDJ | P79226 | FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE FROM RABBIT LIVER | FRUCTOSE 1,6-BISPHOSPHATE ALDOLASE (E.C.4.1.2.13) |
| 2J0G | Q15485 | L-ficolin complexed to N-acetyl-mannosamine | FICOLIN-2 |
| 2J0G | 2J0G | L-ficolin complexed to N-acetyl-mannosamine | FICOLIN-2 |
| 2J0G | Q15485 | L-ficolin complexed to N-acetyl-mannosamine | FICOLIN-2 |
| 2J0G | 2J0G | L-ficolin complexed to N-acetyl-mannosamine | FICOLIN-2 |
| 6LY5 | 6LY5 | Organization and energy transfer in a huge diatom PSI-FCPI supercomplex | FCPI-7, FCPI-1, FCPI-11, FCPI-6, FCPI-5, FCPI-8, FCPI-4, FCPI-10, FCPI-3, FCPI-9, FCPI-13, FCPI-14, FCPI-16, FCPI-21, FCPI, FCPI-24, FCPI-23, FCPI-12, FCPI-17, PsaA, PsaB, PsaC, PsaD, PsaE, PsaF, PsaI, PsaJ, PsaL, PsaM, PsaS, PsaR, FCPI-2, FCPI-19 |
| 1FRT | P13599 | CRYSTAL STRUCTURE OF THE COMPLEX OF RAT NEONATAL FC RECEPTOR WITH FC | FC RECEPTOR (NEONATAL) COMPLEXED WITH FC (IGG) (FC/FCRN COMPLEX) |
| 1FRT | P07151 | CRYSTAL STRUCTURE OF THE COMPLEX OF RAT NEONATAL FC RECEPTOR WITH FC | FC RECEPTOR (NEONATAL) COMPLEXED WITH FC (IGG) (FC/FCRN COMPLEX) |
| 1FRT | 243866 | CRYSTAL STRUCTURE OF THE COMPLEX OF RAT NEONATAL FC RECEPTOR WITH FC | FC RECEPTOR (NEONATAL) COMPLEXED WITH FC (IGG) (FC/FCRN COMPLEX) |
| 5VN8 | B3UEZ6 | Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12 | Envelope glycoprotein gp160, b12 Fab heavy chain, b12 Fab light chain |
| 5VN8 | B3UES2 | Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12 | Envelope glycoprotein gp160, b12 Fab heavy chain, b12 Fab light chain |
| 5VN8 | 5VN8 | Cryo-EM model of B41 SOSIP.664 in complex with fragment antigen binding variable domain of b12 | Envelope glycoprotein gp160, b12 Fab heavy chain, b12 Fab light chain |
| 6CM3 | Q2N0S7 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6CM3 | Q2N0S5 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6CM3 | P01730 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6CM3 | 6CM3 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6EDU | B3UEZ6 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
| 6EDU | B3UES2 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
| 6EDU | P01730 | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
| 6EDU | 6EDU | B41 SOSIP.664 in complex with soluble CD4 (D1-D2), the co-receptor mimicking antibody 21c and the broadly neutralizing antibody 8ANC195 | Envelope glycoprotein gp160, PG9 Fab heavy chain,PG9 Fab heavy chain, PG9 Fab light chain,PG9 Fab light chain, 8ANC195 Fab heavy chain,8ANC195 Fab heavy chain, 8ANC195 Fab light chain,8ANC195 Fab light chain |
| 6CH7 | Q2N0S7 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | Envelope glycoprotein gp160, 35O22 Heavy Chain, 35O22 Light Chain, BG18 Heavy Chain, BG18 Light Chain |
| 6CH7 | 6CH7 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | Envelope glycoprotein gp160, 35O22 Heavy Chain, 35O22 Light Chain, BG18 Heavy Chain, BG18 Light Chain |
| 6CH7 | Q2N0S6 | XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 | Envelope glycoprotein gp160, 35O22 Heavy Chain, 35O22 Light Chain, BG18 Heavy Chain, BG18 Light Chain |
| 4L1R | P06437 | Glycoprotein B from Herpes Simplex Virus type 1, A549T Rate-of-Entry mutant, low-pH | Envelope glycoprotein B |
| 7LOK | Q2N0S6 | Structure of CD4 mimetic M48U1 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | Envelope Glycoprotein BG505 SOSIP.664 gp41, Envelope glycoprotein BG505 SOSIP.664 gp120, 17b Fab Light Chain, 17b Fab Heavy Chain, M48U1 |
| 7LOK | 7LOK | Structure of CD4 mimetic M48U1 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | Envelope Glycoprotein BG505 SOSIP.664 gp41, Envelope glycoprotein BG505 SOSIP.664 gp120, 17b Fab Light Chain, 17b Fab Heavy Chain, M48U1 |
| 3JTC | Q9UNN8 | Importance of Mg2+ in the Ca2+-Dependent Folding of the gamma-Carboxyglutamic Acid Domains of Vitamin K-Dependent clotting and anticlotting Proteins | Endothelial protein C receptor, Vitamin K-dependent protein C (E.C.3.4.21.69) |
| 3JTC | P04070 | Importance of Mg2+ in the Ca2+-Dependent Folding of the gamma-Carboxyglutamic Acid Domains of Vitamin K-Dependent clotting and anticlotting Proteins | Endothelial protein C receptor, Vitamin K-dependent protein C (E.C.3.4.21.69) |
| 3X2P | B3Y002 | Neutron and X-ray joint refined structure of PcCel45A with cellopentaose at 298K. | Endoglucanase V-like protein |
| 5EGE | Q8BGN3 | Structure of ENPP6, a choline-specific glycerophosphodiester-phosphodiesterase | Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 (E.C.3.1.4.-,3.1.4.38) |
| 5KEN | Q05320 | EBOV GP in complex with variable Fab domains of IgGs c4G7 and c13C6 | Ebola surface glycoprotein, GP1, Ebola surface glycoprotein, GP2, c4G7 variable Fab domain heavy chain, c4G7 variable Fab domain light chain, c13C6 variable Fab domain light chain, c13C6 variable Fab domain heavy chain |
| 5KEN | 5KEN | EBOV GP in complex with variable Fab domains of IgGs c4G7 and c13C6 | Ebola surface glycoprotein, GP1, Ebola surface glycoprotein, GP2, c4G7 variable Fab domain heavy chain, c4G7 variable Fab domain light chain, c13C6 variable Fab domain light chain, c13C6 variable Fab domain heavy chain |
| 1Q55 | 1Q55 | W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography | EP-cadherin, ectodomain |
| 1Q5A | 1Q5A | S-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography | EP-cadherin, ectodomain |
| 1Q5B | 1Q5B | lambda-shaped TRANS and CIS interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography | EP-cadherin, ectodomain |
| 1Q5C | 1Q5C | S-S-lambda-shaped TRANS and CIS interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography | EP-cadherin, ectodomain |
