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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID | Title ▼ | Descriptor |
|---|---|---|---|
| 7CWU | 7CWU | SARS-CoV-2 spike proteins trimer in complex with P17 and FC05 Fabs cocktail | Spike glycoprotein, heavy chain of P17 Fab, light chain of P17 Fab, heavy chain of FC05 Fab, light chain of FC05 Fab |
| 8F4P | P0DTC2 | SARS-CoV-2 spike protein trimer (down conformation) bound with a nanobody | |
| 8F4P | 8F4P | SARS-CoV-2 spike protein trimer (down conformation) bound with a nanobody | |
| 8K9M | 8K9M | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-3 | |
| 8K9M | P0DTC2 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-3 | |
| 8K9J | 8K9J | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2 | |
| 8K9J | P0DTC2 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2 | |
| 7WHZ | P0DTC2 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | 7WHZ | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | A0A5C2G4I7 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | A0A5C2GTV1 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | A0A5C2GVU3 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7P79 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybodyb#15 in a 1up/1up-out/1down conformation. | |
| 7P79 | 7P79 | SARS-CoV-2 spike protein in complex with sybodyb#15 in a 1up/1up-out/1down conformation. | |
| 7P7A | 7P7A | SARS-CoV-2 spike protein in complex with sybody#68 in a 2up/1flexible conformation | |
| 7P7A | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#68 in a 2up/1flexible conformation | |
| 7P77 | 7P77 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | |
| 7P77 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | |
| 7P78 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 1up/1up-out/1down conformation | |
| 7P78 | 7P78 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 1up/1up-out/1down conformation | |
| 8K9B | 8K9B | SARS-CoV-2 spike protein in complex with one S2H5 Fab | |
| 8K9B | P0DTC2 | SARS-CoV-2 spike protein in complex with one S2H5 Fab | |
| 7KXJ | P0DTC2 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric | |
| 7KXJ | 7KXJ | SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric | |
| 7KXK | P0DTC2 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation | |
| 7KXK | 7KXK | SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation | |
| 8EYG | P0DTC2 | SARS-CoV-2 spike protein complexed with two nanobodies | |
| 8EYG | 8EYG | SARS-CoV-2 spike protein complexed with two nanobodies | |
| 8EYH | P0DTC2 | SARS-CoV-2 spike protein bound with a nanobody | |
| 8EYH | 8EYH | SARS-CoV-2 spike protein bound with a nanobody | |
| 7CWL | P0DTC2 | SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state | Spike glycoprotein, Fab P17 heavy chain, Fab P17 light chain |
| 7CWL | 7CWL | SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state | Spike glycoprotein, Fab P17 heavy chain, Fab P17 light chain |
| 8VIF | 8VIF | SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement | |
| 8VIF | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement | |
| 8VKE | 8VKE | SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs | |
| 8VKE | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs | |
| 6ZP7 | P0DTC2 | SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation) | |
| 6ZP5 | P0DTC2 | SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation) | |
| 6ZOW | P0DTC2 | SARS-CoV-2 spike in prefusion state | |
| 7WHB | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 7WHB | 7WHB | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 7WHD | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7WHD | 7WHD | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7JW0 | P0DTC2 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S304 Fab light chain, S304 Fab heavy chain |
| 7JW0 | 7JW0 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S304 Fab light chain, S304 Fab heavy chain |
| 7K43 | P0DTC2 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2M11 Fab fragment (heavy chain), S2M11 Fab fragment (light chain) |
| 7K43 | 7K43 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2M11 Fab fragment (heavy chain), S2M11 Fab fragment (light chain) |
| 7TAT | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7TAT | 7TAT | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7TAS | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) |
