GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
---|---|
GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID ▼ | Title | Descriptor |
---|---|---|---|
5CBL | P56470 | Crystal structure of the C-terminal domain of human galectin-4 with lactose | |
5DUV | P56470 | Crystal structure of the human galectin-4 N-terminal carbohydrate recognition domain in complex with lactose | |
5DUW | P56470 | Crystal structure of the human galectin-4 N-terminal carbohydrate recognition domain in complex with lactose-3'-sulfate | |
5DUX | P56470 | Crystal structure of the human galectin-4 N-terminal carbohydrate recognition domain in complex with 2'-fucosyllactose | |
3CYQ | P56427 | The crystal structure of the complex of the C-terminal domain of Helicobacter pylori MotB (residues 125-256) with N-acetylmuramic acid | |
1DOT | P56410 | CRYSTALLOGRAPHIC STRUCTURE OF DUCK OVOTRANSFERRIN AT 2.3 ANGSTROMS RESOLUTION | DUCK OVOTRANSFERRIN |
6AH4 | P56373 | Structure of human P2X3 receptor in complex with ATP and Ca2+ ion | P2X purinoceptor 3 |
5SVJ | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel in the closed, apo state | P2X purinoceptor 3 |
5SVK | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, open state | P2X purinoceptor 3 |
5SVL | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel in the ATP-bound, closed (desensitized) state | P2X purinoceptor 3 |
5SVM | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel bound to agonist 2-methylthio-ATP in the desensitized state | P2X purinoceptor 3 |
5SVP | P56373 | Anomalous sulfur signal reveals the position of agonist 2-methylthio-ATP bound to the ATP-gated human P2X3 ion channel in the desensitized state | P2X purinoceptor 3 |
5SVQ | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel bound to competitive antagonist TNP-ATP | P2X purinoceptor 3 |
5SVR | P56373 | Crystal structure of the ATP-gated human P2X3 ion channel bound to competitive antagonist A-317491 | P2X purinoceptor 3 |
5SVS | P56373 | Anomalous Mn2+ signal reveals a divalent cation-binding site in the head domain of the ATP-gated human P2X3 ion channel | P2X purinoceptor 3 |
5SVT | P56373 | Anomalous Cs+ signal reveals the site of Na+ ion entry to the channel pore of the human P2X3 ion channel through the extracellular fenestrations | P2X purinoceptor 3 |
5YVE | P56373 | Crystal structure of human P2X3 receptor in complex with the AF-219 negative allosteric modulator | P2X purinoceptor 3 |
6AH5 | P56373 | Structure of human P2X3 receptor in complex with ATP and Mg2+ ion | P2X purinoceptor 3 |
8BD3 | P56348 | Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi | |
8BD3 | P56339 | Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi | |
8BD3 | P56327 | Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi | |
8BD3 | P56310 | Cryo-EM structure of the Photosystem II - LHCII supercomplex from Chlorella ohadi | |
1A78 | P56217 | COMPLEX OF TOAD OVARY GALECTIN WITH THIO-DIGALACTOSE | |
1GAN | P56217 | COMPLEX OF TOAD OVARY GALECTIN WITH N-ACETYLGALACTOSE | |
6JLM | P56152 | XFEL structure of cyanobacterial photosystem II (dark state, dataset2) | |
6JLN | P56152 | XFEL structure of cyanobacterial photosystem II (1F state, dataset2) | |
6JLK | P56152 | XFEL structure of cyanobacterial photosystem II (1F state, dataset1) | |
6JLP | P56152 | XFEL structure of cyanobacterial photosystem II (3F state, dataset2) | |
7CJI | P56152 | Photosystem II structure in the S1 state | |
7CJJ | P56152 | Photosystem II structure in the S2 state | |
5V2C | P56152 | RE-REFINEMENT OF CRYSTAL STRUCTURE OF PHOTOSYSTEM II COMPLEX | |
6JLL | P56152 | XFEL structure of cyanobacterial photosystem II (2F state, dataset1) | |
6JLO | P56152 | XFEL structure of cyanobacterial photosystem II (2F state, dataset2) | |
5WS5 | P56152 | Native XFEL structure of photosystem II (preflash dark dataset) | |
5WS6 | P56152 | Native XFEL structure of Photosystem II (preflash two-flash dataset | Photosystem II protein D1, Photosystem II CP47 reaction center protein,Photosystem II CP43 reaction center protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta,Photosystem II reaction center protein H, Photosystem II reaction center protein I,Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, hotosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
6JLJ | P56152 | XFEL structure of cyanobacterial photosystem II (dark state, dataset1) | |
7COU | P56152 | Structure of cyanobacterial photosystem II in the dark S1 state | |
7D1U | P56152 | Cryo-EM Structure of PSII at 2.08 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
7EDA | P56152 | Structure of monomeric photosystem II | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
3WU2 | P56152 | Crystal structure analysis of Photosystem II complex | Photosystem Q(B) protein, Photosystem II CP47 chlorophyll apoprotein, Photosystem II 44 kDa reaction center protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z |
5B5E | P56152 | Crystal structure analysis of Photosystem II complex | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z |
5B66 | P56152 | Crystal structure analysis of Photosystem II complex | |
5GTH | P56152 | Native XFEL structure of photosystem II (dark dataset) | |
5GTI | P56152 | Native XFEL structure of photosystem II (two flash dataset) | Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II PsbK protein, Photosystem II reaction center protein L, Photosystem II PsbM protein, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
7D1T | P56152 | Cryo-EM Structure of PSII at 1.95 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
8GN0 | P56152 | Crystal structure of DCBQ-bound photosystem II complex | |
8GN1 | P56152 | Crystal structure of DBBQ-bound photosystem II complex | |
8GN2 | P56152 | Crystal structure of PPBQ-bound photosystem II complex | |
8IR5 | P56152 | XFEL structure of cyanobacterial photosystem II under dark conditions | |
8IR6 | P56152 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
GlyCosmos Portal v4.0.0
Last updated: August 19, 2024