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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 8OXS | P01556 | Cholera holotoxin variant (chimera with E. coli heat-labile enterotoxin, 4 C-terminal substitutions) | |
| 2XH6 | P01558 | Clostridium perfringens enterotoxin | |
| 2LMS | P01563 | A single GalNAc residue on Threonine-106 modifies the dynamics and the structure of Interferon alpha-2a around the glycosylation site | |
| 1AU1 | P01574 | HUMAN INTERFERON-BETA CRYSTAL STRUCTURE | INTERFERON-BETA |
| 6E3K | P01579 | Interferon gamma signalling complex with IFNGR1 and IFNGR2 | |
| 6E3L | P01579 | Interferon gamma signalling complex with IFNGR1 and IFNGR2 | |
| 3BES | P01579 | Structure of a Poxvirus ifngbp/ifng Complex | Interferon gamma, Interferon-gamma binding protein C4R |
| 3O4O | P01584 | Crystal structure of an Interleukin-1 receptor complex | |
| 4DEP | P01584 | Structure of the IL-1b signaling complex | Interleukin-1 beta, Interleukin-1 receptor type 1, Interleukin-1 receptor accessory protein |
| 2B5I | P01589 | cytokine receptor complex | |
| 2ERJ | P01589 | Crystal structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2 | |
| 3IU3 | P01589 | Crystal structure of the Fab fragment of therapeutic antibody Basiliximab in complex with IL-2Ra (CD25) ectodomain | |
| 7Y0J | P01591 | Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum TM284VAR1 | |
| 6UE8 | P01591 | Structure of tetrameric sIgA complex (Class 1) | Immunoglobulin heavy constant alpha 2, Polymeric immunoglobulin receptor, Immunoglobulin J chain |
| 6KXS | P01591 | Cryo-EM structure of human IgM-Fc in complex with the J chain and the ectodomain of pIgR | |
| 6UEA | P01591 | Structure of pentameric sIgA complex | Immunoglobulin heavy constant alpha 2, Polymeric immunoglobulin receptor, Immunoglobulin J chain |
| 7K0C | P01591 | Structure of Secretory IgM Core | Polymeric immunoglobulin receptor, Immunoglobulin heavy constant mu, Immunoglobulin J chain |
| 6UE7 | P01591 | Structure of dimeric sIgA complex | Immunoglobulin heavy constant alpha 1, Polymeric immunoglobulin receptor, Immunoglobulin J chain |
| 6UE9 | P01591 | Structure of tetrameric sIgA complex (Class 2) | Immunoglobulin heavy constant alpha 2, Polymeric immunoglobulin receptor, Immunoglobulin J chain |
| 7Y0H | P01591 | Cryo-EM structure of human IgM-Fc in complex with the J chain and the P. falciparum VAR2CSA FCR3 | |
| 8SKU | P01591 | Structure of human SIgA1 in complex with human CD89 (FcaR1) | |
| 8SKV | P01591 | Structure of human SIgA1 in complex with Streptococcus pyogenes protein M4 (Arp4) | |
| 7Y09 | P01591 | Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP | |
| 7YG2 | P01591 | Cryo-EM structure of human IgM-Fc in complex with the J chain and the DBL domain of DBLMSP2 | |
| 7YSG | P01591 | Cryo-EM structure of human FcmR bound to sIgM | |
| 7YTC | P01591 | Cryo-EM structure of human FcmR bound to IgM-Fc/J | |
| 7YTD | P01591 | Cryo-EM structure of four human FcmR bound to IgM-Fc/J | |
| 7JG2 | P01592 | Secretory Immunoglobin A (SIgA) | Igh protein, Polymeric immunoglobulin receptor, Immunoglobulin J chain |
| 7JG1 | P01592 | Dimeric Immunoglobin A (dIgA) | Igh protein, Immunoglobulin J chain |
| 7CZQ | P01594 | S protein of SARS-CoV-2 in complex bound with P2B-1A10 | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 7CZU | P01594 | S protein of SARS-CoV-2 in complex bound with P5A-1B6_2B | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 7CZV | P01594 | S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 5OWP | P01726 | Crystal structure of glycopeptide "GVTSAfPDT*RPAP" in complex with scFv-SM3 | |
| 5A2I | P01727 | Crystal structure of scFv-SM3 in complex with APD-SGalNAc-RP | |
| 5A2K | P01727 | Crystal structure of scFv-SM3 in complex with APD-TGalNAc-RP | |
| 5A2L | P01727 | Crystal structure of scFv-SM3 in complex with APD-CGalNAc-RP | |
| 5N7B | P01727 | Understanding the singular conformational landscape of the Tn antigens: Sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody | |
| 6OPO | P01730 | Symmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6U0N | P01730 | Asymmetrically open conformational state (Class II) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab | HIV-1 envelope glycoprotein gp120, T-cell surface glycoprotein CD4, E51 Fab heavy chain, E51 Fab light chain, HIV-1 envelope glycoprotein gp41 |
| 6L1Y | P01730 | structure of gp120/CD4 with a non-canonical surface | |
| 6OPQ | P01730 | CD4- and 17-bound HIV-1 Env B41 SOSIP frozen with LMNG | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6U0L | P01730 | Asymmetrically open conformational state (Class I) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab | |
| 5THR | P01730 | Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex | T-cell surface glycoprotein CD4, 17b Fab VH domain, BG505 SOSIP gp41 monomer, clade A/E 93TH057 HIV-1 gp120 core, 17b Fb VL domain, 8ANC195 G52K5 VH domain, 8ANC195 G52K5 VL domain |
| 6CM3 | P01730 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6MEO | P01730 | Structural basis of coreceptor recognition by HIV-1 envelope spike | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, C-C chemokine receptor type 5 |
| 6OPN | P01730 | CD4- and 17-bound HIV-1 Env B41 SOSIP in complex with small molecule GO35 | Envelope glycoprotein gp160, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4 |
| 6OPP | P01730 | Asymmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | 17b Fab light chain, Envelope glycoprotein gp41, Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6X5B | P01730 | Symmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with small molecule GO52 | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6X5C | P01730 | Asymmetric model of CD4-bound B41 HIV-1 Env SOSIP in complex with small molecule GO52 | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 5VN3 | P01730 | Cryo-EM model of B41 SOSIP.664 in complex with soluble CD4 (D1-D2) and fragment antigen binding variable domain of 17b | 17b Fab light chain, Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
