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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID ▼ | Title | Descriptor |
|---|---|---|---|
| 7CZT | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-2G9 | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 6VSB | P0DTC2 | Prefusion 2019-nCoV spike glycoprotein with a single receptor-binding domain up | Spike glycoprotein |
| 6VW1 | P0DTC2 | Structure of SARS-CoV-2 chimeric receptor-binding domain complexed with its receptor human ACE2 | |
| 6X6P | P0DTC2 | Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis | SARS-CoV-2 spike glycoprotein |
| 6X79 | P0DTC2 | Prefusion SARS-CoV-2 S ectodomain trimer covalently stabilized in the closed conformation | SARS-CoV-2 spike glycoprotein |
| 6XC3 | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.1 and CR3022 | |
| 6XCM | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 1) | Spike glycoprotein, C105 Fab Heavy Chain, C105 Fab Light Chain |
| 6XCN | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 2) | Spike glycoprotein, C105 Fab Heavy Chain, C105 Fab Light Chain |
| 6XKP | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CV07-270 | |
| 6XLU | P0DTC2 | Structure of SARS-CoV-2 spike at pH 4.0 | |
| 6XM0 | P0DTC2 | Consensus structure of SARS-CoV-2 spike at pH 5.5 | |
| 6XM3 | P0DTC2 | Structure of SARS-CoV-2 spike at pH 5.5, single RBD up, conformation 1 | |
| 6XM4 | P0DTC2 | Structure of SARS-CoV-2 spike at pH 5.5, single RBD up, conformation 2 | |
| 6XM5 | P0DTC2 | Structure of SARS-CoV-2 spike at pH 5.5, all RBDs down | |
| 6XR8 | P0DTC2 | Distinct conformational states of SARS-CoV-2 spike protein | Spike glycoprotein |
| 6XRA | P0DTC2 | Distinct conformational states of SARS-CoV-2 spike protein | Spike glycoprotein |
| 6YZ5 | P0DTC2 | H11-D4 complex with SARS-CoV-2 RBD | |
| 6YZ7 | P0DTC2 | H11-D4, SARS-CoV-2 RBD, CR3022 ternary complex | |
| 6Z2M | P0DTC2 | H11-D4, SARS-CoV-2 RBD, CR3022 ternary complex | |
| 6Z43 | P0DTC2 | Cryo-EM Structure of SARS-CoV-2 Spike : H11-D4 Nanobody Complex | Spike glycoprotein, Nanobody |
| 6Z97 | P0DTC2 | Structure of the prefusion SARS-CoV-2 spike glycoprotein | SARS-CoV-2 RBD, Heavy Chain, Light chain |
| 6ZB4 | P0DTC2 | SARS CoV-2 Spike protein, Closed conformation, C1 symmetry | Spike glycoprotein |
| 6ZB5 | P0DTC2 | SARS CoV-2 Spike protein, Closed conformation, C3 symmetry | Spike glycoprotein |
| 6ZBP | P0DTC2 | H11-H4 complex with SARS-CoV-2 | |
| 6ZCZ | P0DTC2 | Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in ternary complex with EY6A Fab and a nanobody. | |
| 6ZDG | P0DTC2 | Association of three complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab | |
| 6ZDH | P0DTC2 | SARS-CoV-2 Spike glycoprotein in complex with a neutralizing antibody EY6A Fab | |
| 6ZER | P0DTC2 | Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with EY6A Fab | |
| 6ZFO | P0DTC2 | Association of two complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab | |
| 6ZGE | P0DTC2 | Uncleavable Spike Protein of SARS-CoV-2 in Closed Conformation | Spike glycoprotein |
| 6ZGI | P0DTC2 | Furin Cleaved Spike Protein of SARS-CoV-2 in Closed Conformation | Spike glycoprotein |
| 6ZHD | P0DTC2 | H11-H4 bound to Spike | Spike glycoprotein,Fibritin, Nanobody H11-H4 |
| 6ZLR | P0DTC2 | Soaking competent crystal form of the SARS-CoV-2 Receptor Binding Domain (RBD):CR3022 complex. | |
| 7BEM | P0DTC2 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 scFv | |
| 7BNM | P0DTC2 | Closed conformation of D614G SARS-CoV-2 spike protein | Spike glycoprotein |
| 7BNN | P0DTC2 | Open conformation of D614G SARS-CoV-2 spike with 1 Erect RBD | Spike glycoprotein |
| 7BYR | P0DTC2 | BD23-Fab in complex with the S ectodomain trimer | Spike glycoprotein, Ab23-Fab-Heavy Chain, Ab23-Fab-Light Chain |
| 7C2L | P0DTC2 | S protein of SARS-CoV-2 in complex bound with 4A8 | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 7CDI | P0DTC2 | Crystal structure of SARS-CoV-2 antibody P2C-1F11 with RBD | |
| 7CDJ | P0DTC2 | Crystal structure of SARS-CoV-2 antibody P2C-1A3 with RBD | |
| 7CZV | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B | Spike glycoprotein, heavy chain of 4A8, light chain of 4A8 |
| 7D0B | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-3C12_1B | Spike glycoprotein, Light chain of 207Fab, Heavy chain of 207 Fab |
| 7D30 | P0DTC2 | Structure of sybody MR17-SR31 fusion in complex with the SARS-CoV-2 S Receptor Binding domain (RBD) | |
| 7DEO | P0DTC2 | Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv | |
| 7DX4 | P0DTC2 | The structure of FC08 Fab-hA.CE2-RBD complex | |
| 7DX7 | P0DTC2 | Trypsin-digested S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 1 (1 up RBD and 1 PD bound) | Sodium-dependent neutral amino acid transporter B(0)AT1, Angiotensin-converting enzyme 2 (E.C.3.4.17.23) |
| 7E3L | P0DTC2 | Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants | |
| 7EB0 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Spike D614G variant, one RBD-up conformation 2 | |
| 7JMO | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody COVA2-04 | |
| 7JMP | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody COVA2-39 |
