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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID ▼ | Title | Descriptor |
|---|---|---|---|
| 7X2K | P0DTC2 | Crystal structure of nanobody Nb70 with antibody 1F11 fab and SARS-CoV-2 RBD | |
| 7XA7 | P0DTC2 | Crystal structure of SARS-CoV-2 receptor-binding domain in complex with intermediate horseshoe bat ACE2 | |
| 7WHB | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 7WHD | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 8DXT | P0DTC2 | Fab arm of antibody GAR12 bound to the receptor binding domain of SARS-CoV-2. | |
| 8DXU | P0DTC2 | Fab arms of antibodies GAR03 and 10G4 bound to the receptor binding domain of SARS-CoV-2 in a 1:1:1 complex. | |
| 7WRH | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2 | |
| 7YCK | P0DTC2 | Crystal structure of SARS-CoV-2 Spike RBD in complex with FP-12A Fab | |
| 7YCL | P0DTC2 | Crystal structure of SARS-CoV-2 Spike RBD in complex with IS-9A Fab | |
| 7YCN | P0DTC2 | Crystal structure of SARS-CoV-2 Spike RBD in complex with IY-2A Fab | |
| 8A94 | P0DTC2 | SARS CoV2 Spike in the 2-up state in complex with Fab47. | |
| 8A94 | P0DTC2 | SARS CoV2 Spike in the 2-up state in complex with Fab47. | |
| 8F0G | P0DTC2 | Structure of SARS-CoV-2 Omicron BA.1 spike in complex with antibody Fab 1C3 | |
| 8F0H | P0DTC2 | Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10) | |
| 7YBK | P0DTC2 | SARS-CoV-2 B.1.620 variant spike (open state) | |
| 7XOE | P0DTC2 | Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state) | |
| 7XOE | P0DTC2 | Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state) | |
| 8VKK | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein | |
| 8VKL | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (conformation 2) | |
| 8VKM | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (conformation 1) | |
| 8VKN | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with mouse ACE2 (focused refinement of RBD and mouse ACE2) | |
| 8VKO | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with human ACE2 | |
| 8VKP | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 spike protein in complex with human ACE2 (focused refinement of RBD and ACE2) | |
| 8CII | P0DTC2 | Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody | |
| 8CIN | P0DTC2 | BA.4/5-5 FAB IN COMPLEX WITH SARS-COV-2 BA.4 SPIKE GLYCOPROTEIN | |
| 8EKD | P0DTC2 | Cryo-EM map of SARS-CoV-2 Omicron BA.2 spike in complex with 2130-1-0114-112 | |
| 8G70 | P0DTC2 | SARS-CoV-2 spike/nanobody mixture complex | |
| 8G71 | P0DTC2 | Spike/Nb2 complex with 1 RBD up | |
| 8G76 | P0DTC2 | SARS-CoV-2 spike/Nb5 complex | |
| 8G77 | P0DTC2 | SARS-CoV-2 spike/Nb6 complex | |
| 8G78 | P0DTC2 | Local refinement of SARS-CoV-2 spike/nanobody mixture complex around NTD | |
| 8G7A | P0DTC2 | SARS-CoV-2 spike/Nb3 complex with 2 RBDs up and 3 Nb3 (local refinement) | |
| 8G7B | P0DTC2 | SARS-CoV-2 spike/Nb3 complex with 1 RBD up and 2 Nb3 (local refinement) | |
| 8G7C | P0DTC2 | local refinement of SARS-CoV-2 spike/Nb4 complex with 2 RBDs up and 3 Nb4 bound | |
| 7XOG | P0DTC2 | Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state) | |
| 7XOG | P0DTC2 | Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state) | |
| 7FH0 | P0DTC2 | Crystallographic structure of two neutralizing nanobodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD) | |
| 7QTI | P0DTC2 | SARS-CoV-2 S Omicron Spike B.1.1.529 - 3-P2G3 and 1-P5C3 Fabs (Global) | |
| 7T7B | P0DTC2 | Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with a cross-neutralizing antibody ADI-62113 Fab | |
| 8DF5 | P0DTC2 | SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab | |
| 8DT3 | P0DTC2 | Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined) | |
| 7WRJ | P0DTC2 | Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-4637 Fab | |
| 7WRY | P0DTC2 | Local structure of BD55-3546 Fab and SARS-COV2 Delta RBD complex | |
| 7XCO | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Omicron spike protein (S-6P-RRAR) in complex with S309 fab | |
| 7XWA | P0DTC2 | Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron BA.4/5 variant spike protein in complex with its receptor ACE2 | |
| 7Y0C | P0DTC2 | Crystal structure of BD55-1403 and SARS-CoV-2 Omicron RBD | |
| 7Y0V | P0DTC2 | The co-crystal structure of BA.1-RBD with Fab-5549 | |
| 7Y0W | P0DTC2 | Local structure of BD55-5514 and BD55-5840 Fab and Omicron BA.1 RBD complex | |
| 7Y9Z | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Omicron spike protein (S-6P-RRAR) in complex with human ACE2 ectodomain (one-RBD-up state) | |
| 7YA0 | P0DTC2 | Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (S-6P-RRAR) |
