GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID ▲ | Title | Descriptor |
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1OB2 | P0CE48 | E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA | |
3TV3 | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with Man9 | PGT128 light chain, Ig lambda-2 chain C regions, PGT128 heavy chain, Ig gamma-1 chain C region |
3TV3 | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with Man9 | PGT128 light chain, Ig lambda-2 chain C regions, PGT128 heavy chain, Ig gamma-1 chain C region |
3TWC | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT127 in complex with Man9 | |
3TWC | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT127 in complex with Man9 | |
3TYG | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with a glycosylated engineered gp120 outer domain with miniV3 (eODmV3) | |
3TYG | P0CG05 | Crystal structure of broad and potent HIV-1 neutralizing antibody PGT128 in complex with a glycosylated engineered gp120 outer domain with miniV3 (eODmV3) | |
4O58 | P0CG05 | Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin | |
4O58 | P0CG05 | Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/3/1975 (H3N2) influenza hemagglutinin | |
4O5I | P0CG05 | Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/361/2011 (H3N2) influenza hemagglutinin | |
4O5I | P0CG05 | Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/361/2011 (H3N2) influenza hemagglutinin | |
5D9Q | P0CG06 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46 | |
5D9Q | P0CG06 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46 | |
5M93 | P0CG47 | Crystal structure of SdeA-modified ubiquitin. | |
3B08 | P0CG48 | Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin | |
3RUL | P0CG48 | New strategy to analyze structures of glycopeptide-target complexes | |
3VFK | P0CG48 | The structure of monodechloro-teicoplanin in complex with its ligand, using ubiquitin as a ligand carrier | |
7AD3 | P0CI39 | Class D GPCR Ste2 dimer coupled to two G proteins | Pheromone alpha factor receptor, Alpha-factor mating pheromone, STE4 isoform 1, Guanine nucleotide-binding protein alpha-1 subunit,Guanine nucleotide-binding protein alpha-1 subunit, Guanine nucleotide-binding protein subunit gamma |
7QA8 | P0CI39 | Structure of the GPCR dimer Ste2 bound to an antagonist | |
7QB9 | P0CI39 | Structure of the ligand-free GPCR dimer Ste2 | |
7QBC | P0CI39 | Structure of the GPCR dimer Ste2 in the inactive-like state bound to agonist | |
7QBI | P0CI39 | Structure of the GPCR dimer Ste2 in the active-like state bound to agonist | |
8J6Z | P0CJ48 | Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2) | |
7T25 | P0CL66 | OspA-Fab 319-44 complex structure | |
4ADF | P0CW72 | CRYSTAL STRUCTURE OF THE HUMAN COLONY-STIMULATING FACTOR 1 (hCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1 | |
4ADQ | P0CW72 | CRYSTAL STRUCTURE OF THE MOUSE COLONY-STIMULATING FACTOR 1 (MCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1 | |
4FA8 | P0CW72 | Multi-pronged modulation of cytokine signaling | Secreted protein BARF1, Macrophage colony-stimulating factor 1 |
7CFT | P0DKR6 | Cryo-EM strucutre of human acid-sensing ion channel 1a in complex with snake toxin Mambalgin1 at pH 8.0 | Acid-sensing ion channel 1, Mambalgin-1 |
6JLM | P0DM37 | XFEL structure of cyanobacterial photosystem II (dark state, dataset2) | |
6JLN | P0DM37 | XFEL structure of cyanobacterial photosystem II (1F state, dataset2) | |
6JLK | P0DM37 | XFEL structure of cyanobacterial photosystem II (1F state, dataset1) | |
6JLP | P0DM37 | XFEL structure of cyanobacterial photosystem II (3F state, dataset2) | |
7CJI | P0DM37 | Photosystem II structure in the S1 state | |
7CJJ | P0DM37 | Photosystem II structure in the S2 state | |
6JLL | P0DM37 | XFEL structure of cyanobacterial photosystem II (2F state, dataset1) | |
6JLO | P0DM37 | XFEL structure of cyanobacterial photosystem II (2F state, dataset2) | |
5WS5 | P0DM37 | Native XFEL structure of photosystem II (preflash dark dataset) | |
5WS6 | P0DM37 | Native XFEL structure of Photosystem II (preflash two-flash dataset | Photosystem II protein D1, Photosystem II CP47 reaction center protein,Photosystem II CP43 reaction center protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta,Photosystem II reaction center protein H, Photosystem II reaction center protein I,Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, hotosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
6JLJ | P0DM37 | XFEL structure of cyanobacterial photosystem II (dark state, dataset1) | |
7COU | P0DM37 | Structure of cyanobacterial photosystem II in the dark S1 state | |
7D1U | P0DM37 | Cryo-EM Structure of PSII at 2.08 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
7EDA | P0DM37 | Structure of monomeric photosystem II | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
4UB6 | P0DM37 | Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser | |
4UB8 | P0DM37 | Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser | |
5GTH | P0DM37 | Native XFEL structure of photosystem II (dark dataset) | |
5GTI | P0DM37 | Native XFEL structure of photosystem II (two flash dataset) | Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II PsbK protein, Photosystem II reaction center protein L, Photosystem II PsbM protein, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
7D1T | P0DM37 | Cryo-EM Structure of PSII at 1.95 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
8IR5 | P0DM37 | XFEL structure of cyanobacterial photosystem II under dark conditions | |
8IR6 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay | |
8IR7 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024