GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID ▼ | Title | Descriptor |
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5YC5 | P0DOX5 | Crystal structure of human IgG-Fc in complex with aglycan and optimized Fc gamma receptor IIIa | |
6N2X | P0DOX5 | Anti-HIV-1 Fab 2G12 + Man9 re-refinement | |
6N2X | P0DOX5 | Anti-HIV-1 Fab 2G12 + Man9 re-refinement | |
6V8Z | P0DOX5 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | envelope glycoprotein gp120, envelope glycoprotein gp41, VRC03 VH, 10-1074 VH, 10-1074 VL, VRC03 VL |
6V8Z | P0DOX5 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | envelope glycoprotein gp120, envelope glycoprotein gp41, VRC03 VH, 10-1074 VH, 10-1074 VL, VRC03 VL |
6VSZ | P0DOX5 | Crystal structure of a human afucosylated IgG1 Fc expressed in tobacco plants (Nicotiana benthamiana) | |
6YT7 | P0DOX5 | GLYCOSYLATED KNOB/DUMMY-HOLE FC FRAGMENT | |
8DV1 | P0DOX5 | SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to linker variant of affinity matured ACE2 mimetic CVD432 | |
8DV2 | P0DOX5 | SARS-CoV-2 Wuhan-hu-1-Spike-RBD bound to computationally engineered ACE2 mimetic CVD293 | |
8GHR | P0DOX5 | Structure of human ENPP1 in complex with variable heavy domain VH27.2 | |
8W4L | P0DOX5 | Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz | |
8W4M | P0DOX5 | Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz | |
8EDF | P0DOX5 | Bovine Fab SKD in complex with Sars COV-2 receptor binding domain | |
8EDF | P0DOX5 | Bovine Fab SKD in complex with Sars COV-2 receptor binding domain | |
9IIE | P0DOX5 | Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap | |
8TTM | P0DOX5 | IgG1 Fc Heterodimer combYSelect1 | |
8TUD | P0DOX5 | IgG1 Fc Heterodimer combYSelect2 | |
8ZCK | P0DOX5 | Serial Femtosecond Crystallography Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap | |
8ZCL | P0DOX5 | Ambient Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap | |
8ZCM | P0DOX5 | Cryogenic Temperature Crystal Structure of Fc Fragment of Human IgG1 from Biosimilar VEGF-Trap | |
7FIG | P0DN86 | luteinizing hormone/choriogonadotropin receptor(S277I)-chorionic gonadotropin-Gs complex | |
8OLT | P0DN34 | Mitochondrial complex I from Mus musculus in the active state bound with piericidin A | |
8OM1 | P0DN34 | Mitochondrial complex I from Mus musculus in the active state | |
8C2S | P0DN34 | Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 1). | |
8CA3 | P0DN34 | Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 2). | |
8CA5 | P0DN34 | Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart (Class 3). | |
6JLM | P0DM37 | XFEL structure of cyanobacterial photosystem II (dark state, dataset2) | |
6JLN | P0DM37 | XFEL structure of cyanobacterial photosystem II (1F state, dataset2) | |
6JLK | P0DM37 | XFEL structure of cyanobacterial photosystem II (1F state, dataset1) | |
6JLP | P0DM37 | XFEL structure of cyanobacterial photosystem II (3F state, dataset2) | |
7CJI | P0DM37 | Photosystem II structure in the S1 state | |
7CJJ | P0DM37 | Photosystem II structure in the S2 state | |
6JLL | P0DM37 | XFEL structure of cyanobacterial photosystem II (2F state, dataset1) | |
6JLO | P0DM37 | XFEL structure of cyanobacterial photosystem II (2F state, dataset2) | |
5WS5 | P0DM37 | Native XFEL structure of photosystem II (preflash dark dataset) | |
5WS6 | P0DM37 | Native XFEL structure of Photosystem II (preflash two-flash dataset | Photosystem II protein D1, Photosystem II CP47 reaction center protein,Photosystem II CP43 reaction center protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta,Photosystem II reaction center protein H, Photosystem II reaction center protein I,Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, hotosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
6JLJ | P0DM37 | XFEL structure of cyanobacterial photosystem II (dark state, dataset1) | |
7COU | P0DM37 | Structure of cyanobacterial photosystem II in the dark S1 state | |
7D1U | P0DM37 | Cryo-EM Structure of PSII at 2.08 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
7EDA | P0DM37 | Structure of monomeric photosystem II | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
4UB6 | P0DM37 | Native structure of photosystem II (dataset-1) by a femtosecond X-ray laser | |
4UB8 | P0DM37 | Native structure of photosystem II (dataset-2) by a femtosecond X-ray laser | |
5GTH | P0DM37 | Native XFEL structure of photosystem II (dark dataset) | |
5GTI | P0DM37 | Native XFEL structure of photosystem II (two flash dataset) | Photosystem II D1 protein, Photosystem II CP47 reaction center protein, Photosystem II CP43 protein, Photosystem II D2 protein, Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II PsbK protein, Photosystem II reaction center protein L, Photosystem II PsbM protein, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein X, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein Z, Photosystem II protein Y |
7D1T | P0DM37 | Cryo-EM Structure of PSII at 1.95 angstrom resolution | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Photosystem II manganese-stabilizing polypeptide, Photosystem II reaction center protein T, Photosystem II 12 kDa extrinsic protein, Cytochrome c-550, Photosystem II reaction center protein Ycf12, Photosystem II reaction center protein X, Photosystem II reaction center protein Z, Photosystem II protein Y |
8IR5 | P0DM37 | XFEL structure of cyanobacterial photosystem II under dark conditions | |
8IR6 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay | |
8IR7 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay | |
8IR8 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 1-microsecond delay | |
8IR9 | P0DM37 | XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024