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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 8WE4 | P0DTC2 | SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304 | |
| 8K9B | P0DTC2 | SARS-CoV-2 spike protein in complex with one S2H5 Fab | |
| 8K9J | P0DTC2 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-2 | |
| 8K9M | P0DTC2 | SARS-CoV-2 spike protein in complex with two S2H5 Fabs on NTD-1 and NTD-3 | |
| 8VCR | P0DTC2 | SARS-CoV-2 Spike S2 bound to Fab 54043-5 | |
| 8SDH | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56 | |
| 8VIF | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement | |
| 8VKE | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs | |
| 8VQ9 | P0DTC2 | Prefusion stabilized structure of the SARS-CoV-2 fusion machinery | |
| 8VQA | P0DTC2 | Prefusion stabilized structure of the SARS-CoV-2 fusion machinery | |
| 8VQB | P0DTC2 | Prefusion stabilized structure of the SARS-CoV-2 fusion machinery | |
| 8QZR | P0DTC2 | SARS-CoV-2 delta RBD complexed with BA.4/5-9 Fab | |
| 8C2R | P0DTC2 | SARS-CoV2 Omicron BA.1 spike in complex with CAB-A17 antibody | |
| 8JVA | P0DTC2 | Cryo-EM structure of the N-terminal domain of Omicron BA.1 in complex with nanobody N235 and S2L20 Fab | |
| 8SWH | P0DTC2 | Local refinement of SARS-CoV-2 (HP-GSAS-Mut7) spike NTD in complex with TXG-0078 Fab | |
| 8X0X | P0DTC2 | Crystal structure of JE-5C in complex with SARS-CoV-2 RBD | |
| 8X0Y | P0DTC2 | Crystal structure of JM-1A in complex with SARS-CoV-2 RBD | |
| 8YZ6 | P0DTC2 | SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B | |
| 9FGR | P0DTC2 | SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv76-77 (focused refinement) | |
| 8VAO | P0DTC2 | Simulation-driven design of prefusion stabilized SARS-CoV-2 spike S2 antigen | |
| 8WMD | P0DTC2 | Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-2 state) | |
| 8WMF | P0DTC2 | Structure of the SARS-CoV-2 EG.5.1 spike glycoprotein (closed-1 state) | |
| 8XI6 | P0DTC2 | SARS-CoV-2 Omicron BQ.1.1 Variant Spike Protein Complexed with MO11 Fab | |
| 7XMN | P0DTC8 | Structure of SARS-CoV-2 ORF8 | |
| 6W4H | P0DTD1 | 1.80 Angstrom Resolution Crystal Structure of NSP16 - NSP10 Complex from SARS-CoV-2 | |
| 7L6R | P0DTD1 | Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and Manganese (Mn). | |
| 7L6T | P0DTD1 | Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer in Complex with (m7GpppA2m)pUpUpApApA (Cap-1), S-Adenosyl-L-homocysteine (SAH) and two Magnesium (Mg) ions. | |
| 7MPB | P0DTD1 | SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate | |
| 8XS3 | P0DTN2 | Structure of MPXV B6 and D68 fab complex | |
| 8T4Z | P0DTU4 | T-cell receptor and lipid complex structure | |
| 7ALK | P10041 | Structure of Drosophila C2-DSL-EGF1 | |
| 4BLD | P10071 | Crystal structure of a human Suppressor of fused (SUFU)-GLI3p complex | |
| 7A4N | P10104 | Cryo-EM structure of a prefusion stabilized SARS-CoV-2 Spike (D614N, R682S, R685G, A892P, A942P and V987P)(S-closed trimer) | Spike glycoprotein,Fibritin |
| 7QUR | P10104 | SARS-CoV-2 Spike with ethylbenzamide-tri-iodo Siallyllactose, C3 symmetry | |
| 7ZR7 | P10104 | OMI-42 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE GLYCOPROTEIN | |
| 7ZR8 | P10104 | OMI-38 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE RBD (local refinement) | |
| 7ZR9 | P10104 | OMI-2 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE GLYCOPROTEIN | |
| 7ZRC | P10104 | OMI-38 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE | |
| 7QUS | P10104 | SARS-CoV-2 Spike, C3 symmetry | |
| 7QDG | P10104 | SARS-CoV-2 S protein S:A222V + S:D614G mutant 1-up | |
| 7QDH | P10104 | SARS-CoV-2 S protein S:D614G mutant 1-up | |
| 5TDL | P10104 | Crystal structure of prefusion-stabilized bovine RSV fusion glycoprotein (single-chain DS2-v1 variant: strain 391-2 sc9 DS-Cav1 Q98C Q361C) | Bovine prefusion RSV F glycoprotein |
| 6Z97 | P10104 | Structure of the prefusion SARS-CoV-2 spike glycoprotein | SARS-CoV-2 RBD, Heavy Chain, Light chain |
| 6ZHD | P10104 | H11-H4 bound to Spike | Spike glycoprotein,Fibritin, Nanobody H11-H4 |
| 4MMU | P10104 | Crystal Structure of Prefusion-stabilized RSV F Variant DS-Cav1 at pH 5.5 | |
| 7NS6 | P10104 | SARS-CoV-2 Spike (dimers) in complex with six Fu2 nanobodies | |
| 8OYT | P10104 | Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation | |
| 7ZJ6 | P10104 | X-31 Hemagglutinin Precursor HA0 at pH 7.5 | |
| 7ZJ7 | P10104 | X-31 Hemagglutinin Precursor HA0 at pH 4.8 | |
| 7ZJ8 | P10104 | X-31 Hemagglutinin Precursor HA0 at pH 7.5 after reneutralization |
