GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID ▲ | Title | Descriptor |
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8AQW | P10104 | BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8H3D | P10104 | Structure of apo SARS-CoV-2 spike protein with one RBD up | |
8H3E | P10104 | Complex structure of a small molecule (SPC-14) bound SARS-CoV-2 spike protein, closed state | |
8CIM | P10104 | BA.2-07 FAB IN COMPLEX WITH SARS-COV-2 BA.2.12.1 SPIKE GLYCOPROTEIN | |
8OYU | P10104 | Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation | |
9FGS | P10104 | SARS-CoV-2 (wuhan variant) Spike protein in complex with the single chain fragment scFv41N (focused refinement) | |
9FGT | P10104 | SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76 (focused refinement) | |
9FGU | P10104 | SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76-77 (focused refinement) | |
7ZCE | P10104 | SARS-CoV-2 Spike protein in complex with the single chain fragment scFv76 | |
7ZCF | P10104 | SARS-CoV-2 Spike RBD in complex with the single chain fragment scFv76 (Focused Refinement) | |
7ZH1 | P10104 | SARS CoV Spike protein, Closed C3 conformation | |
7ZH2 | P10104 | SARS CoV Spike protein, Closed C1 conformation | |
7ZH5 | P10104 | SARS CoV Spike protein, Open conformation | |
8AQS | P10104 | BA.4/5 SARS-CoV-2 Spike bound to human ACE2 (local) | |
8AQT | P10104 | Beta SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQU | P10104 | BA.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8AQV | P10104 | BA.2.12.1 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
8QPR | P10104 | SARS-CoV-2 S protein bound to human neutralising antibody UZGENT_G5 | |
8QQ0 | P10104 | SARS-CoV-2 S protein bound to neutralising antibody UZGENT_A3 | |
8AJA | P10104 | Structure of the Ancestral Scaffold Antigen-5 of Coronavirus Spike protein | |
8AJL | P10104 | Structure of the Ancestral Scaffold Antigen-6 of Coronavirus Spike protein | |
7Z6V | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11 nanobody complex | |
7Z7X | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H6 nanobody complex | |
7Z85 | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-B5 nanobody complex | |
7Z86 | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 1Up2Down conformation | |
7Z9Q | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-A10 nanobody complex | |
7Z9R | P10104 | CRYO-EM STRUCTURE OF SARS-COV-2 SPIKE : H11-H4 Q98R H100E nanobody complex in 2Up1Down conformation | |
8BON | P10104 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the macrocyclic peptide S1B3inL1 | |
8R1C | P10104 | SD1-2 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein | |
8R1D | P10104 | SD1-3 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein | |
1FQ3 | P10144 | CRYSTAL STRUCTURE OF HUMAN GRANZYME B | |
1IAU | P10144 | HUMAN GRANZYME B IN COMPLEX WITH AC-IEPD-CHO | |
4ZKB | P10147 | The chemokine binding protein of orf virus complexed with CCL3 | |
5D65 | P10147 | X-RAY STRUCTURE OF MACROPHAGE INFLAMMATORY PROTEIN-1 ALPHA (CCL3) WITH HEPARIN COMPLEX | |
7EV7 | P10175 | Bovine heart cytochrome c oxidase in the carbon monoxide-bound fully reduced state at a 50 K | |
5XDQ | P10175 | Bovine heart cytochrome c oxidase in the fully oxidized state with pH 7.3 at 1.77 angstrom resolution | |
5XDX | P10175 | Bovine heart cytochrome c oxidase in the reduced state with pH 7.3 at 1.99 angstrom resolution | |
5Z84 | P10175 | The structure of azide-bound cytochrome c oxidase determined using the crystals exposed to 20 mM azide solution for 4 days | |
5Z85 | P10175 | The structure of azide-bound cytochrome c oxidase determined using the another batch crystals exposed to 20 mM azide solution for 2 days | |
5Z86 | P10175 | azide-bound cytochrome c oxidase structure determined using the crystals exposed to 20 mM azide solution for 3 days | |
5ZCO | P10175 | azide-bound cytochrome c oxidase structure determined using the crystals exposed to 2 mM azide solution for 2 days | |
5ZCP | P10175 | azide-bound cytochrome c oxidase structure determined using the crystals exposed to 20 mM azide solution for 2 days | |
5ZCQ | P10175 | Azide-bound cytochrome c oxidase structure determined using the crystals exposed to 10 mM azide solution for 2 days | |
6JUW | P10175 | BOVINE HEART CYTOCHROME C OXIDASE IN CATALITIC INTERMEDIATES AT 1.80 ANGSTROM RESOLUTION | |
6NMP | P10175 | SFX structure of oxidized cytochrome c oxidase at room temperature | |
5W97 | P10175 | Crystal Structure of CO-bound Cytochrome c Oxidase determined by Serial Femtosecond X-Ray Crystallography at Room Temperature | |
5WAU | P10175 | Crystal Structure of CO-bound Cytochrome c Oxidase determined by Synchrotron X-Ray Crystallography at 100 K | |
5X19 | P10175 | CO bound cytochrome c oxidase at 100 micro sec after pump laser irradiation to release CO from O2 reduction center | |
5X1B | P10175 | CO bound cytochrome c oxidase at 20 nsec after pump laser irradiation to release CO from O2 reduction center | Cytochrome c oxidase subunit 1 (E.C.1.9.3.1), Cytochrome c oxidase subunit 2, Cytochrome c oxidase subunit 3, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, Cytochrome c oxidase subunit 5A, mitochondrial, Cytochrome c oxidase subunit 5B, mitochondrial, Cytochrome c oxidase subunit 6A2, mitochondrial, Cytochrome c oxidase subunit 6B1, Cytochrome c oxidase subunit 6C, Cytochrome c oxidase subunit 7A1, mitochondrial, Cytochrome c oxidase subunit 7B, mitochondrial, Cytochrome c oxidase subunit 7C, mitochondrial, Cytochrome c oxidase subunit 8B, mitochondrial |
5X1F | P10175 | CO bound cytochrome c oxidase without pump laser irradiation at 278K |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024