GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
---|---|
GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID | Title ▲ | Descriptor |
---|---|---|---|
5V2C | D0VWR5 | RE-REFINEMENT OF CRYSTAL STRUCTURE OF PHOTOSYSTEM II COMPLEX | |
5ES4 | P20702 | RE-REFINEMENT OF INTEGRIN ALPHAXBETA2 ECTODOMAIN IN THE CLOSED/BENT CONFORMATION | |
5ES4 | P05107 | RE-REFINEMENT OF INTEGRIN ALPHAXBETA2 ECTODOMAIN IN THE CLOSED/BENT CONFORMATION | |
1AYO | P01023 | RECEPTOR BINDING DOMAIN OF BOVINE ALPHA-2-MACROGLOBULIN | ALPHA-2-MACROGLOBULIN |
1LCS | 323911 | RECEPTOR-BINDING DOMAIN FROM SUBGROUP B FELINE LEUKEMIA VIRUS | |
1MFE | 208365 | RECOGNITION OF A CELL-SURFACE OLIGO-SACCHARIDE OF PATHOGENIC SALMONELLA BY AN ANTIBODY FAB FRAGMENT | FAB FRAGMENT (MURINE SE155-4) COMPLEX WITH DODECASACCHARIDE {-3)ALPHA-D-GALACTOSE(1-2)[ALPHA-D-ABEQUOSE(1-3)]ALPHA-D-MANNOSE(1-4)ALPHA-L-RHAMNOSE(1-} (PART OF THE CELL SURFACE CARBOHYDRATE OF PATHOGENIC SALMONELLA) |
1MFE | 387376 | RECOGNITION OF A CELL-SURFACE OLIGO-SACCHARIDE OF PATHOGENIC SALMONELLA BY AN ANTIBODY FAB FRAGMENT | FAB FRAGMENT (MURINE SE155-4) COMPLEX WITH DODECASACCHARIDE {-3)ALPHA-D-GALACTOSE(1-2)[ALPHA-D-ABEQUOSE(1-3)]ALPHA-D-MANNOSE(1-4)ALPHA-L-RHAMNOSE(1-} (PART OF THE CELL SURFACE CARBOHYDRATE OF PATHOGENIC SALMONELLA) |
1HKC | P19367 | RECOMBINANT HUMAN HEXOKINASE TYPE I COMPLEXED WITH GLUCOSE AND PHOSPHATE | |
2YLD | P00138 | RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND AT 1.25 A | |
3ZWI | P00138 | RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS: CARBON MONOOXIDE BOUND AT 1.25 A:UNRESTRAINT REFINEMENT | |
1DMB | P02928 | REFINED 1.8 ANGSTROMS STRUCTURE REVEALS THE MECHANISM OF BINDING OF A CYCLIC SUGAR, BETA-CYCLODEXTRIN, TO THE MALTODEXTRIN BINDING PROTEIN | |
3SC2 | P08819 | REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT 2.2-ANGSTROMS RESOLUTION | SERINE CARBOXYPEPTIDASE II (E.C.3.4.16.1) (CPDW-II) |
6NN9 | P03472 | REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS | NEURAMINIDASE N9 (E.C.3.2.1.18) (SIALIDASE) (MUTANT WITH LYS 432 REPLACED BY ASN) (K432N) |
3NN9 | P03472 | REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS | NEURAMINIDASE N9 (E.C.3.2.1.18) (SIALIDASE) (MUTANT WITH ASN 329 REPLACED BY ASP) (N329D) |
4NN9 | P03472 | REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS | NEURAMINIDASE N9 (E.C.3.2.1.18) (SIALIDASE) (MUTANT WITH ILE 368 REPLACED BY ARG) (I368R) |
5NN9 | P03472 | REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS NEURAMINIDASE AND ESCAPE MUTANTS | NEURAMINIDASE N9 (E.C.3.2.1.18) (SIALIDASE) (MUTANT WITH ALA 369 REPLACED BY ASP) (A369D) |
1AOZ | P37064 | REFINED CRYSTAL STRUCTURE OF ASCORBATE OXIDASE AT 1.9 ANGSTROMS RESOLUTION | ASCORBATE OXIDASE (E.C.1.10.3.3) |
2FBJ | P01810 | REFINED CRYSTAL STRUCTURE OF THE GALACTAN-BINDING IMMUNOGLOBULIN FAB J539 AT 1.95-ANGSTROMS RESOLUTION | IGA FAB FRAGMENT (J539) (GALACTAN-BINDING) |
2FBJ | 437099 | REFINED CRYSTAL STRUCTURE OF THE GALACTAN-BINDING IMMUNOGLOBULIN FAB J539 AT 1.95-ANGSTROMS RESOLUTION | IGA FAB FRAGMENT (J539) (GALACTAN-BINDING) |
1NCA | P01865 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
1NCA | Y11589 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
1NCA | P03472 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
1NCD | P01865 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
1NCD | Y11589 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
1NCD | P05803 | REFINED CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS N9 NEURAMINIDASE-NC41 FAB COMPLEX | N9 NEURAMINIDASE-NC41 (E.C.3.2.1.18) COMPLEX WITH FAB |
6GPB | P00489 | REFINED CRYSTAL STRUCTURE OF THE PHOSPHORYLASE-HEPTULOSE 2-PHOSPHATE-OLIGOSACCHARIDE-AMP COMPLEX | GLYCOGEN PHOSPHORYLASE B (E.C.2.4.1.1) (T STATE) COMPLEX WITH HEPTULOSE 2-PHOSPHATE AND MALTOHEPTAOSE AND AMP |
1GLM | P69327 | REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 | GLUCOAMYLASE-471 (1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE) (E.C.3.2.1.3) |
3GLY | P22832 | REFINED CRYSTAL STRUCTURES OF GLUCOAMYLASE FROM ASPERGILLUS AWAMORI VAR. X100 | GLUCOAMYLASE-471 (1,4-ALPHA-D-GLUCAN GLUCOHYDROLASE) (E.C.3.2.1.3) |
1DOG | P23176 | REFINED STRUCTURE FOR THE COMPLEX OF 1-DEOXYNOJIRIMYCIN WITH GLUCOAMYLASE FROM (ASPERGILLUS AWAMORI) VAR. X100 TO 2.4 ANGSTROMS RESOLUTION | GLUCOAMYLASE-471 (GLUCAN 1,4-ALPHA-GLUCOSIDASE) (E.C.3.2.1.3) COMPLEXED WITH 1-DEOXYNOJIRIMYCIN |
5CNA | P02866 | REFINED STRUCTURE OF CONCANAVALIN A COMPLEXED WITH ALPHA-METHYL-D-MANNOPYRANOSIDE AT 2.0 ANGSTROMS RESOLUTION AND COMPARISON WITH THE SACCHARIDE-FREE STRUCTURE | |
1MDP | P02928 | REFINED STRUCTURES OF TWO INSERTION(SLASH)DELETION MUTANTS PROBE FUNCTION OF THE MALTODEXTRIN BINDING PROTEIN | |
1MDQ | P02928 | REFINED STRUCTURES OF TWO INSERTION(SLASH)DELETION MUTANTS PROBE FUNCTION OF THE MALTODEXTRIN BINDING PROTEIN | |
1HEW | P00698 | REFINEMENT OF AN ENZYME COMPLEX WITH INHIBITOR BOUND AT PARTIAL OCCUPANCY. HEN EGG-WHITE LYSOZYME AND TRI-N-ACETYLCHITOTRIOSE AT 1.75 ANGSTROMS RESOLUTION | LYSOZYME (E.C.3.2.1.17) COMPLEXED WITH THE INHIBITOR TRI-N-ACETYLCHITOTRIOSE |
2HMG | P03437 | REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING | HEMAGGLUTININ (G146(A)D) (BROMELAIN DIGESTED) (MUTANT WITH GLY 146 REPLACED BY ASP IN HA1 CHAINS) |
3HMG | P03437 | REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING | HEMAGGLUTININ (L226(A)Q) (BROMELAIN DIGESTED) (MUTANT WITH LEU 226 REPLACED BY GLN IN HA1 CHAINS) |
4HMG | P03437 | REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING | HEMAGGLUTININ (L226(A)Q) (BROMELAIN DIGESTED) (MUTANT WITH LEU 226 REPLACED BY GLN IN HA1 CHAINS) COMPLEX WITH SIALIC ACID |
5HMG | P03437 | REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING | HEMAGGLUTININ (D112(B)G) (BROMELAIN DIGESTED) (MUTANT WITH ASP 112 REPLACED BY GLY IN HA2 CHAINS) COMPLEX WITH SIALIC ACID |
4RZ1 | P00797 | RENIN IN COMPLEXED WITH (3S,4S)-4-({[4-methoxy-3-(3-methoxypropoxy)benzoyl](propan-2-yl)amino}methyl)pyrrolidin-3-yl benzylcarbamate INHIBITOR | Renin (E.C.3.4.23.15) |
4RYC | P00797 | RENIN IN COMPLEXED WITH 4-methoxy-3-(3-methoxypropoxy)-N-{[(3S,4S)-4-{[(4-methylphenyl)sulfonyl]amino}pyrrolidin-3-yl]methyl}-N-(propan-2-yl)benzamide INHIBITOR | Renin (E.C.3.4.23.15) |
4RYG | P00797 | RENIN IN COMPLEXED WITH N-({(3S,4S)-4-[(benzylsulfonyl)amino]pyrrolidin-3-yl}methyl)-4-methoxy-3-(3-methoxypropoxy)-N-(propan-2-yl)benzamide INHIBITOR | Renin (E.C.3.4.23.15) |
4UX8 | P07949 | RET recognition of GDNF-GFRalpha1 ligand by a composite binding site promotes membrane-proximal self-association | PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET (E.C.2.7.10.1), GDNF FAMILY RECEPTOR ALPHA-1, GLIAL CELL LINE-DERIVED NEUROTROPHIC FACTOR |
4UX8 | O35748 | RET recognition of GDNF-GFRalpha1 ligand by a composite binding site promotes membrane-proximal self-association | PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET (E.C.2.7.10.1), GDNF FAMILY RECEPTOR ALPHA-1, GLIAL CELL LINE-DERIVED NEUROTROPHIC FACTOR |
4UX8 | P39905 | RET recognition of GDNF-GFRalpha1 ligand by a composite binding site promotes membrane-proximal self-association | PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET (E.C.2.7.10.1), GDNF FAMILY RECEPTOR ALPHA-1, GLIAL CELL LINE-DERIVED NEUROTROPHIC FACTOR |
7AML | A8E7C6 | RET/GDNF/GFRa1 extracellular complex Cryo-EM structure | |
7AML | Q98TT9 | RET/GDNF/GFRa1 extracellular complex Cryo-EM structure | |
7AML | Q98TU0 | RET/GDNF/GFRa1 extracellular complex Cryo-EM structure | |
1DEO | Q00017 | RHAMNOGALACTURONAN ACETYLESTERASE FROM ASPERGILLUS ACULEATUS AT 1.55 A RESOLUTION WITH SO4 IN THE ACTIVE SITE | RHAMNOGALACTURONAN ACETYLESTERASE |
1DEX | Q00017 | RHAMNOGALACTURONAN ACETYLESTERASE FROM ASPERGILLUS ACULEATUS AT 1.9 A RESOLUTION | RHAMNOGALACTURONAN ACETYLESTERASE |
1RMG | A55415 | RHAMNOGALACTURONASE A FROM ASPERGILLUS ACULEATUS | RHAMNOGALACTURONASE A |
6ZDX | Q8I4N9 | RIFIN variable region bound to LILRB1 ectodomain |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
GlyCosmos Portal v4.0.0
Last updated: August 19, 2024