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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | January 08, 2025 |
| PDB ID | UniProt ID | Title ▲ | Descriptor |
|---|---|---|---|
| 7K4N | P0DTC2 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment | |
| 7K4N | 7K4N | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment | |
| 7K45 | P0DTC2 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains) | |
| 7K45 | 7K45 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains) | |
| 7JV6 | P0DTC2 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation) | |
| 7JV6 | 7JV6 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation) | |
| 7JV4 | P0DTC2 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | |
| 7JV4 | 7JV4 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | |
| 7TAS | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) | |
| 7TAS | 7TAS | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) | |
| 7TAT | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7TAT | 7TAT | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7K43 | P0DTC2 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | |
| 7K43 | 7K43 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | |
| 7JW0 | P0DTC2 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | |
| 7JW0 | 7JW0 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | |
| 7WHD | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7WHD | 7WHD | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7WHB | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 7WHB | 7WHB | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 6ZOW | P0DTC2 | SARS-CoV-2 spike in prefusion state | |
| 6ZP5 | P0DTC2 | SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation) | |
| 6ZP7 | P0DTC2 | SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up open conformation) | |
| 8VKE | 8VKE | SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs | |
| 8VKE | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs | |
| 8VIF | 8VIF | SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement | |
| 8VIF | P0DTC2 | SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement | |
| 7CWL | P0DTC2 | SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state | |
| 7CWL | 7CWL | SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state | |
| 8EYH | P0DTC2 | SARS-CoV-2 spike protein bound with a nanobody | |
| 8EYH | 8EYH | SARS-CoV-2 spike protein bound with a nanobody | |
| 8EYG | P0DTC2 | SARS-CoV-2 spike protein complexed with two nanobodies | |
| 8EYG | 8EYG | SARS-CoV-2 spike protein complexed with two nanobodies | |
| 7KXK | P0DTC2 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation | |
| 7KXK | 7KXK | SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation | |
| 7KXJ | P0DTC2 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric | |
| 7KXJ | 7KXJ | SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric | |
| 8K9B | 8K9B | SARS-CoV-2 spike protein in complex with one S2H5 Fab | |
| 8K9B | P0DTC2 | SARS-CoV-2 spike protein in complex with one S2H5 Fab | |
| 7P78 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 1up/1up-out/1down conformation | |
| 7P78 | 7P78 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 1up/1up-out/1down conformation | |
| 7P77 | 7P77 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | |
| 7P77 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | |
| 7P7A | 7P7A | SARS-CoV-2 spike protein in complex with sybody#68 in a 2up/1flexible conformation | |
| 7P7A | P0DTC2 | SARS-CoV-2 spike protein in complex with sybody#68 in a 2up/1flexible conformation | |
| 7P79 | P0DTC2 | SARS-CoV-2 spike protein in complex with sybodyb#15 in a 1up/1up-out/1down conformation. | |
| 7P79 | 7P79 | SARS-CoV-2 spike protein in complex with sybodyb#15 in a 1up/1up-out/1down conformation. | |
| 7WHZ | P0DTC2 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | 7WHZ | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WHZ | A0A5C2G4I7 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies |
