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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | September 04, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 6NTF | 6NTF | Crystal structure of a computationally optimized H5 influenza hemagglutinin | |
| 6NV2 | 6NV2 | 14-3-3 sigma with RelA/p65 binding site pS45 in complex with DP005 | |
| 6NWE | 6NWE | Crystal structure of bovine opsin with beta octyl glucoside bound | |
| 6NYP | 6NYP | Crystal structure of UL144/BTLA complex | Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9 |
| 6NYQ | 6NYQ | Crystal structure of glycosylated lysosomal membrane protein (GLMP) luminal domain bound to a Fab fragment | 1H3 Fab light chain, 1H3 Fab heavy chain, Glycosylated lysosomal membrane protein |
| 6NZ7 | 6NZ7 | Crystal structure of broadly neutralizing Influenza A antibody 429 B01 in complex with Hemagglutinin Hong Kong 1968 | Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, 429 B01 FAB heavy chain, 429 B01 FAB light chain |
| 6NZ7 | 6NZ7 | Crystal structure of broadly neutralizing Influenza A antibody 429 B01 in complex with Hemagglutinin Hong Kong 1968 | Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, 429 B01 FAB heavy chain, 429 B01 FAB light chain |
| 6O39 | 6O39 | Crystal structure of Frizzled 5 CRD in complex with F2.I Fab | |
| 6O3A | 6O3A | Crystal structure of Frizzled 7 CRD in complex with F7.B Fab | |
| 6O3B | 6O3B | Crystal structure of Frizzled 7 CRD in complex with F6 Fab | |
| 6O3C | 6O3C | Crystal structure of active Smoothened bound to SAG21k, cholesterol, and NbSmo8 | |
| 6O8D | 6O8D | Anti-CD28xCD3 CODV Fab bound to CD28 | |
| 6OB5 | 6OB5 | Computationally-designed, modular sense/response system (S3-2D) | |
| 6OC3 | 6OC3 | Crystal structure of FluA-20 Fab in complex with the head domain of H1 (A/Solomon Islands/3/2006) | |
| 6OCB | 6OCB | Crystal structure of FluA-20 Fab in complex with the head domain of H3 (A/Hong Kong/1/1968) | |
| 6OEJ | 6OEJ | CRYSTAL STRUCTURE OF THE NON-NEUTRALIZING AND ADCC-POTENT ANTIBODY C11 IN COMPLEX WITH HIV-1 CLADE A/E GP120 | |
| 6OEL | 6OEL | Engineered Fab bound to IL-4 receptor | |
| 6OFI | 6OFI | CRYSTAL STRUCTURE OF the RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP120 | |
| 6OGE | 6OGE | Cryo-EM structure of Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex | Receptor tyrosine-protein kinase erbB-2 (E.C.2.7.10.1), Pertuzumab Fab - light chain, Pertuzumab Fab - heavy chain, Trastuzumab Fab - light chain, Trastuzumab Fab - heavy chain |
| 6OGE | 6OGE | Cryo-EM structure of Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex | Receptor tyrosine-protein kinase erbB-2 (E.C.2.7.10.1), Pertuzumab Fab - light chain, Pertuzumab Fab - heavy chain, Trastuzumab Fab - light chain, Trastuzumab Fab - heavy chain |
| 6OGX | 6OGX | Ternary complex of OX40R (TNFRSF4) bound to Fab1 and Fab2 | Fab 1 Heavy Chain, Fab1 Light Chain, Tumor necrosis factor receptor superfamily member 4, Fab2 heavy chain, Fab2 light chain |
| 6OKD | 6OKD | Crystal Structure of human transferrin receptor in complex with a cystine-dense peptide | |
| 6OKP | 6OKP | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
| 6OKP | 6OKP | B41 SOSIP.664 in complex with the silent-face antibody SF12 and V3-targeting antibody 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Heavy Chain,10-1074 Light Chain, SF12 Heavy Chain,SF12 Light Chain |
| 6OLP | 6OLP | Full length HIV-1 Env AMC011 in complex with PGT151 Fab | Envelope glycoprotein gp120, Envelope glycoprotein gp41, Immunoglobulin G PGT151 Fab, Heavy chain, Immunoglobulin G PGT151 Fab, Light chain |
| 6OM2 | 6OM2 | Crystal structure of atypical integrin alphaV beta8 with proTGF-beta1 ligand peptide | |
| 6OMG | 6OMG | Structure of mouse CD1D- Glc-DAG (sn-1 C18:0, sn-2 C18:1c9)-iNKT TCR Ternary complex | |
| 6OML | 6OML | Human BMP chimera BV261 | Bone morphogenetic protein 2 |
| 6OPA | 6OPA | Crystal structure of bovine Fab NC-Cow1 in complex with HIV-1 BG505 SOSIP.664, and human Fabs 35022 and PGT128 | |
| 6OPO | 6OPO | Symmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6OPP | 6OPP | Asymmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | 17b Fab light chain, Envelope glycoprotein gp41, Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6OPQ | 6OPQ | CD4- and 17-bound HIV-1 Env B41 SOSIP frozen with LMNG | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6OQ7 | 6OQ7 | Structure of the GTD domain of Clostridium difficile toxin B in complex with VHH E3 | |
| 6ORM | 6ORM | Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex) | |
| 6ORN | 6ORN | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch bNAb 10-1074 | Envelope glycoprotein gp41, Envelope glycoprotein gp120, 10-1074 Fab Heavy Chain,10-1074 Fab Light Chain |
| 6ORO | 6ORO | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab874NHP | RC1 variant of HIV-1 Env glycoprotein gp41, RC1 variant of HIV-1 Env glycoprotein gp120, Ab874NHP antibody Fab heavy chain, Ab874NHP antibody Fab light chain |
| 6ORP | 6ORP | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab897NHP | Envelope glycoprotein gp41, Envelope glycoprotein gp120, Ab897NHP antibody Fab heavy chain, Ab897NHP antibody Fab light chain |
| 6ORQ | 6ORQ | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab275MUR | Envelope glycoprotein gp41, Envelope glycoprotein gp120, Ab275MUR antibody Fab heavy chain, Ab275MUR antibody Fab light chain |
| 6OS0 | 6OS0 | Structure of synthetic nanobody-stabilized angiotensin II type 1 receptor bound to angiotensin II | |
| 6OS2 | 6OS2 | Structure of synthetic nanobody-stabilized angiotensin II type 1 receptor bound to TRV026 | |
| 6OSY | 6OSY | Cryo-EM structure of vaccine-elicited antibody 0PV-a.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | Envelope glycoprotein gp120, Envelope glycoprotein gp41, VRC03 Heavy Chain, VRC03 Light Chain, PGT122 Heavy Chain, PGT122 Light Chain, 0PV-c.01 Heavy Chain, 0PV-c.01 Light Chain |
| 6OT1 | 6OT1 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | Envelope glycoprotein gp120, Envelope glycoprotein gp41, VRC03 Heavy Chain, VRC03 Light Chain, PGT122 Heavy Chain, PGT122 Light Chain, 0PV-c.01 Heavy Chain, 0PV-c.01 Light Chain |
| 6OUS | 6OUS | Structure of fusion glycoprotein from human respiratory syncytial virus | |
| 6OZ2 | 6OZ2 | Crystal structure of the broadly neutralizing antibody N49P6 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core. | |
| 6OZ3 | 6OZ3 | Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core | |
| 6OZ4 | 6OZ4 | Crystal structure of broadly neutralizing antibody N49P6 Fab in complex with HIV-1 BG505 SOSIP.664 Env trimer ectodomain. | |
| 6OZ9 | 6OZ9 | Ebola virus glycoprotein in complex with EBOV-520 Fab | Small secreted glycoprotein sGP, Envelope glycoprotein, EBOV-520 Fab light chain, EBOV-520 Fab heavy chain |
| 6OZC | 6OZC | BG505 SOSIP.664 with 2G12 Fab2 | Envelope glycoprotein gp160, Envelope glycoprotein gp41, 2G12 Fab light chain, 2G12 Fab Heavy chain |
| 6P25 | 6P25 | Structure of S. cerevisiae protein O-mannosyltransferase Pmt1-Pmt2 complex bound to the sugar donor and a peptide acceptor | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunits (E.C.2.4.99.18) |
| 6P3R | 6P3R | crystal structure of human Fab H5.31 in complex with influenza A H5N1 Vietnam hemagglutinin head domain |
