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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | October 09, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 5Z5F | Q2I2N4 | Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with L-arabinose | |
| 5Z5H | Q2I2N4 | Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with D-xylose | |
| 5Z5I | Q2I2N4 | Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with L-arabinose and D-xylose | |
| 6ML8 | Q2IBI1 | Crystal structure of hemagglutinin from H1N1 Influenza A virus A/Denver/57 bound to the C05 antibody | |
| 4RY0 | Q2JZQ5 | Crystal structure of ribose transporter solute binding protein RHE_PF00037 from Rhizobium etli CFN 42, TARGET EFI-511357, in complex with D-ribose | |
| 5IBQ | Q2JZQ5 | Crystal structure of an ABC solute binding protein from Rhizobium etli CFN 42 (RHE_PF00037,TARGET EFI-511357) in complex with alpha-D-apiose | |
| 6XBW | Q2KIB5 | Cryo-EM structure of V-ATPase from bovine brain, state 1 | V-type proton ATPase catalytic subunit complex |
| 7KHR | Q2KIB5 | Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain | |
| 3DGV | Q2KIG3 | Crystal structure of thrombin activatable fibrinolysis inhibitor (TAFI) | |
| 7TBB | Q2KNW6 | Crystal structure of Plasmepsin X from Plasmodium falciparum | |
| 7TBC | Q2KNW6 | Crystal structure of Plasmepsin X from Plasmodium falciparum in complex with WM382 | |
| 3L89 | Q2KS96 | Human Adenovirus type 21 knob in complex with domains SCR1 and SCR2 of CD46 (membrane cofactor protein, MCP) | |
| 3CQO | Q2LK81 | Crystal structure of a f-lectin (fucolectin) from morone saxatilis (striped bass) serum | |
| 6Q68 | Q2LKY9 | Crystal structure of bovine ACBD3 GOLD domain in complex with 3A protein of enterovirus-F2 (fusion protein) | |
| 6U2W | Q2M385 | EM structure of MPEG-1(L425K) pre-pore complex bound to liposome | Macrophage-expressed gene 1 protein |
| 6U2K | Q2M385 | EM structure of MPEG-1 (L425K, alpha conformation) soluble pre-pore complex | Macrophage-expressed gene 1 protein |
| 6U2L | Q2M385 | EM structure of MPEG-1 (L425K, beta conformation) soluble pre-pore complex | Macrophage-expressed gene 1 protein |
| 6U23 | Q2M385 | EM structure of MPEG-1(w.t.) soluble pre-pore | Macrophage-expressed gene 1 protein |
| 6U2J | Q2M385 | EM structure of MPEG-1 (L425K, alpha conformation) soluble pre-pore complex | Macrophage-expressed gene 1 protein |
| 2YHH | Q2MDE2 | Microvirin:mannobiose complex | MANNAN-BINDING LECTIN |
| 6FD2 | Q2MFI7 | Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine | |
| 5A56 | Q2MGH6 | The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with 1-O-methyl-T-antigen | |
| 5A57 | Q2MGH6 | The structure of GH101 from Streptococcus pneumoniae TIGR4 in complex with PUGT | |
| 5A58 | Q2MGH6 | The structure of GH101 D764N mutant from Streptococcus pneumoniae TIGR4 in complex with serinyl T-antigen | |
| 5A59 | Q2MGH6 | The structure of GH101 E796Q mutant from Streptococcus pneumoniae TIGR4 in complex with T-antigen | |
| 5A5A | Q2MGH6 | The structure of GH101 E796Q mutant from Streptococcus pneumoniae TIGR4 in complex with PNP-T-antigen | |
| 4BSR | Q2MKA7 | Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P22121 crystal form | LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, R-SPONDIN-1 |
| 4BSS | Q2MKA7 | Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P21 crystal form | LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, R-SPONDIN-1 |
| 4BST | Q2MKA7 | Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in P6122 crystal form | LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, R-SPONDIN-1 |
| 4BSU | Q2MKA7 | Structure of the ectodomain of LGR5 in complex with R-spondin-1 (Fu1Fu2) in C2 crystal form | LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5, R-SPONDIN-1 |
| 4KNG | Q2MKA7 | Crystal structure of human LGR5-RSPO1-RNF43 | Leucine-rich repeat-containing G-protein coupled receptor 5, R-spondin-1, E3 ubiquitin-protein ligase RNF43 (E.C.6.3.2.-) |
| 4KT1 | Q2MKA7 | Complex of R-spondin 1 with LGR4 extracellular domain | |
| 6CDE | Q2N0S5 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | PGT122 Heavy chain, PGT122 Light Chain, VRC03 Light Chain, VRC03 Heavy Chain, Glycoprotein 41, Glycoprotein 120, vFP20.01 Heavy Chain, vFP20.01 Heavy chain |
| 6UDA | Q2N0S5 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
| 5U7M | Q2N0S5 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-378806 in Complex with Human Antibodies PGT122 and 35O22 at 3.8 Angstrom | Envelope glycoprotein gp160, 35O22 HEAVY CHAIN, 35O22 LIGHT CHAIN, PGT122 HEAVY CHAIN, PGT122 LIGHT CHAIN |
| 5U7O | Q2N0S5 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-626529 in Complex with Human Antibodies PGT122 and 35O22 at 3.8 Angstrom | Envelope glycoprotein gp160, 35O22 FAB HEAVY CHAIN, 35O22 FAB LIGHT CHAIN, PGT122 FAB HEAVY CHAIN, PGT122 FAB LIGHT CHAIN |
| 6CDI | Q2N0S5 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | VRC03 Heavy Chain, VRC03 light chain, PGT122 Heavy Chain, PGT122 Light Chain, Glycoprotein 120, Glycoprotein gp41, vFP16.02 Heavy Chain, vFP16.02 Light Chain |
| 6CE0 | Q2N0S5 | Crystal structure of a HIV-1 clade B tier-3 isolate H078.14 UFO-BG Env trimer in complex with broadly neutralizing Fabs PGT124 and 35O22 at 4.6 Angstrom | |
| 6CM3 | Q2N0S5 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6CRQ | Q2N0S5 | Glutaraldehyde-treated BG505 SOSIP.664 Env in complex with PGV04 Fab | |
| 6DFH | Q2N0S5 | BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding | Envelope glycoprotein gp160, germline-reverted BG18 fragment antigen binding heavy chain, germline-reverted BG18 fragment antigen binding light chain |
| 7KLC | Q2N0S5 | Crystal structure of M4H2K1 Fab bound to HIV-1 BG505 gp120 core and to 17b Fab | |
| 7L8E | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point) | |
| 6VY2 | Q2N0S5 | Cryo-EM structure of M1214_N1 Fab in complex with CH505 TF chimeric SOSIP.664 Env trimer | Glycoprotein 120, Glycoprotein 41, M1214 N1 Fab heavy chain, M1214 N1 Fab light chain |
| 7L8F | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-2 from animal Rh.33172 (Wk38 time point) | |
| 7L8G | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-3 from animal Rh.33172 (Wk38 time point) | |
| 4TVP | Q2N0S5 | Crystal Structure of the HIV-1 BG505 SOSIP.664 Env Trimer Ectodomain, Comprising Atomic-Level Definition of Pre-Fusion gp120 and gp41, in Complex with Human Antibodies PGT122 and 35O22 | |
| 7UGP | Q2N0S5 | Cryo-EM structure of BG24 Fabs with an inferred germline light chain and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 containing the N276 gp120 glycan- Class 1 | |
| 7TCN | Q2N0S5 | Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.SOSIP.664 with high-mannose glycans | |
| 7TCO | Q2N0S5 | Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.G458Y.SOSIP.664 with high-mannose glycans |
