GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | September 04, 2024 |
PDB ID | UniProt ID ▲ | Title | Descriptor |
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6S5P | 6S5P | Cfucosylated peptide SBL2 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.46 Angstrom resolution | |
6S5R | 6S5R | Cfucosylated second generation peptide dendrimer SBD6 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 2.08 Angstrom resolution, incomplete structure | |
6S5S | 6S5S | Cfucosylated second generation peptide dendrimer SBD8 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.43 Angstrom resolution | |
6S7G | 6S7G | Cfucosylated linker peptide SBL1 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.84 Angstrom resolution | |
6S7T | 6S7T | Cryo-EM structure of human oligosaccharyltransferase complex OST-B | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B (E.C.2.4.99.18), Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4, Transmembrane protein 258, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit, Magnesium transporter protein 1, Malectin, PEPTIDE |
6S8D | 6S8D | Structure of ZEBOV GP in complex with 1T0227 antibody | Light chain, Heavy chain, Envelope glycoprotein |
6S8I | 6S8I | Structure of ZEBOV GP in complex with 3T0265 antibody | Light Chain, Heavy Chain, Enveloped Glycoprotein 1, Envelope glycoprotein |
6S8J | 6S8J | Structure of ZEBOV GP in complex with 5T0180 antibody | Light Chain, Heavy Chain, Envelope Glycoprotein 1, Envelope glycoprotein |
6S99 | 6S99 | Dimethylated fusion protein of RSL and trimeric coiled coil in complex with cucurbit[7]uril | |
6S99 | 6S99 | Dimethylated fusion protein of RSL and trimeric coiled coil in complex with cucurbit[7]uril | |
6SAO | 6SAO | Structural and functional characterisation of three novel fungal amylases with enhanced stability and pH tolerance | amylase |
6SAU | 6SAU | Structural and functional characterisation of three novel fungal amylases with enhanced stability and pH tolerance. | |
6SEK | 6SEK | Crystal Structure of Ancestral Flavin-containing monooxygenase (FMO) 5 | |
6SH2 | 6SH2 | Crystal structure of human neprilysin E584D in complex with C-type natriuretic peptide. | |
6SHM | 6SHM | An inactive (D136A and D137A) variant of alpha-1,6-mannanase, GH76A of Salegentibacter sp. HEL1_6 in complex with alpha-1,6-mannotetrose | |
6SL5 | 6SL5 | Dunaliella Photosystem I Supercomplex | |
6SLJ | 6SLJ | Structure of the RagAB peptide transporter | |
6SLN | 6SLN | Structure of the RagAB peptide transporter | |
6SNC | 6SNC | crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide | LNO1 Light Chain, LNO1 Heavy Chain, Envelope glycoprotein gp160 |
6SND | 6SND | crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide | LN01 light chain, LN01 heavy chain, Envelope glycoprotein gp160 |
6SNE | 6SNE | crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide | Envelope glycoprotein gp160, LN01 light chain, LN01 heavy chain |
6SNY | 6SNY | Synthetic mimic of an EPCR-binding PfEMP1 bound to EPCR | Synthetic EPCR binding protein, Endothelial protein C receptor |
6STN | 6STN | Three dimensional structure of the giant reed (Arundodonax) lectin (ADL) complex with N-Acetyl glucosamine | |
6STO | 6STO | Three dimensional structure of the giant reed (Arundodonax) lectin (ADL) complex with N-Acetyl lactosamine | |
6STP | 6STP | Three dimensional structure of the giant reed (Arundodonax) lectin (ADL) complex with sialic acid | |
6STQ | 6STQ | Three dimensional structure of the giant reed (Arundodonax) lectin (ADL) complex with N,N'-Diacetylchitobiose; 30 seconds soaking | |
6STR | 6STR | Three dimensional structure of the giant reed (Arundodonax) lectin (ADL) complex with N,N'-Diacetylchitobiose; 60 seconds soaking | |
6SWR | 6SWR | Crystal structure of the lysosomal potassium channel MtTMEM175 T38A mutant soaked with zinc | |
6SWR | 6SWR | Crystal structure of the lysosomal potassium channel MtTMEM175 T38A mutant soaked with zinc | |
6T3F | 6T3F | Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment | |
6TDU | 6TDU | Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, full dimer, rotational states 1 | ATPTB1, ATPTB6, ATPTB12, ATP synthase subunit a, ATP synthase subunit b, ATP synthase subunit d, ATP synthase subunit f, ATP synthase subunit i/j, ATP synthase subunit k, ATP synthase subunit 8, ATPEG1, ATPEG2, ATPEG3, ATPEG4, ATPEG5, ATPEG6, ATPEG7, ATPEG8, ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit gamma, ATP synthase subunit delta, ATP synthase subunit epsilon, p18, oligomycin sensitivity conferring protein (OSCP), inhibitor of F1 (IF1), ATP synthase subunit c, ATPTB3, ATPTB4 |
6TDV | 6TDV | Cryo-EM structure of Euglena gracilis mitochondrial ATP synthase, membrane region | ATPTB1, ATPTB3, ATPTB6, ATPTB12, subunit a, subunit b, subunit d, subunit f, subunit i/j, subunit k, subunit 8, ATPEG1, ATPEG2, ATPEG3, ATPEG4, ATPEG5, ATPEG6, ATPEG7, ATPEG8 |
6TEJ | 6TEJ | Structure of apo IrtAB devoid SID in complex with sybody Syb_NL5 | |
6TMK | 6TMK | Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, composite model | ATPTG11, ATPTG7, ATPTG14, Uncharacterized protein, subunit k, subunit a, subunit i/j, Putative membrane protein, ATPTG15, ATPTG6, ATPTG3, ATPTG17, subunit b, ATPTG12, ATPTG10, subunit f, Putative myosin heavy chain, Cytochrome c1, heme protein, ATPTG2, subunit 8, ATPTG9, Thioredoxin domain-containing protein, ATPTG16, subunit d, Inhibitor of F1, ATP synthase subunit alpha,subunit alpha, ATP synthase subunit beta (E.C.7.1.2.2), ATP synthase F1 gamma subunit, Putative ATP synthase, Putative atp synthase F1, epsilon subunit, ATP synthase F1, delta subunit protein, Putative ATP synthase F0 subunit 9 |
6TMK | 6TMK | Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, composite model | ATPTG11, ATPTG7, ATPTG14, Uncharacterized protein, subunit k, subunit a, subunit i/j, Putative membrane protein, ATPTG15, ATPTG6, ATPTG3, ATPTG17, subunit b, ATPTG12, ATPTG10, subunit f, Putative myosin heavy chain, Cytochrome c1, heme protein, ATPTG2, subunit 8, ATPTG9, Thioredoxin domain-containing protein, ATPTG16, subunit d, Inhibitor of F1, ATP synthase subunit alpha,subunit alpha, ATP synthase subunit beta (E.C.7.1.2.2), ATP synthase F1 gamma subunit, Putative ATP synthase, Putative atp synthase F1, epsilon subunit, ATP synthase F1, delta subunit protein, Putative ATP synthase F0 subunit 9 |
6TSL | 6TSL | Marasmius oreades agglutinin (MOA) in complex with the truncated PVPRAHS synthetic substrate | |
6TSM | 6TSM | Marasmius oreades agglutinin (MOA) in complex with the truncated PVVRAHS synthetic substrate | |
6TYB | 6TYB | Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields | |
6TYS | 6TYS | A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Hendra virus infection | Fusion glycoprotein F0, 5B3 antibody heavy chain, 5B3 antibody light chain |
6TYS | 6TYS | A potent cross-neutralizing antibody targeting the fusion glycoprotein inhibits Nipah virus and Hendra virus infection | Fusion glycoprotein F0, 5B3 antibody heavy chain, 5B3 antibody light chain |
6U02 | 6U02 | CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2 | Neuraminidase (E.C.3.2.1.18), NA-22 fragment antigen binding light chain, NA-22 fragment antigen binding heavy chain |
6U0L | 6U0L | Asymmetrically open conformational state (Class I) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab | |
6U0N | 6U0N | Asymmetrically open conformational state (Class II) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab | HIV-1 envelope glycoprotein gp120, T-cell surface glycoprotein CD4, E51 Fab heavy chain, E51 Fab light chain, HIV-1 envelope glycoprotein gp41 |
6U3M | 6U3M | DQ2-P.fluor-alpha1a | HLA class II histocompatibility antigen, DQ alpha 1 chain, MHC class II HLA-DQ-beta-1 - DQ2-glia-omega1 chimeric protein |
6U3N | 6U3N | LS2.8/3.15 - DQ2-P.fluor-alpha1a complex | |
6U3O | 6U3O | JR51 DQ2-p.aeru-alpha2a complex | |
6U59 | 6U59 | HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B | SOSIP.664 gp120, SOSIP.664 gp41, rabbit antibody 13B Fragment antigen binding light chain, rabbit antibody 13B Fragment antigen binding heavy chain |
6U59 | 6U59 | HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B | SOSIP.664 gp120, SOSIP.664 gp41, rabbit antibody 13B Fragment antigen binding light chain, rabbit antibody 13B Fragment antigen binding heavy chain |
6U6U | 6U6U | IL36R extracellular domain in complex with BI655130 Fab | |
6U7E | 6U7E | HCoV-229E RBD Class III in complex with human APN |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024