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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | January 08, 2025 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 5V7J | Q2N0S6 | Crystal Structure at 3.7 A Resolution of Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer with Four Glycans (N197, N276, N362, and N462) removed in Complex with Neutralizing Antibodies 3H+109L and 35O22. | |
| 5V8L | Q2N0S6 | BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibodies 3BNC117 and PGT145 | |
| 5VIY | Q2N0S6 | BG505 SOSIP.664 in complex with broadly neutralizing antibodies BG1 and 8ANC195 | |
| 5WDU | Q2N0S6 | HIV-1 Env BG505 SOSIP.664 H72C-H564C trimer in complex with bNAbs PGT122 Fab, 35O22 Fab and NIH45-46 scFv | |
| 6B0N | Q2N0S6 | Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A | |
| 6DFG | Q2N0S6 | BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding | |
| 6MTN | Q2N0S6 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor Compound 484 in Complex with Human Antibodies 3H109L and 35O22 at 3.0 Angstrom | |
| 6MU8 | Q2N0S6 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-386150 in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom | |
| 6OT1 | Q2N0S6 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | |
| 6UDJ | Q2N0S6 | HIV-1 bNAb 1-18 in complex with BG505 SOSIP.664 and 10-1074 | |
| 6UTK | Q2N0S6 | Crystal structure of 438-B11 Fab in complex with an uncleaved prefusion optimized (UFO) soluble BG505 trimer and Fab 35O22 at 3.80 Angstrom | |
| 6VI0 | Q2N0S6 | Cryo-EM structure of VRC01.23 in complex with HIV-1 Env BG505 DS.SOSIP | |
| 6VKN | Q2N0S6 | BG505 SOSIP.v5.2.N241.N289 in complex with rhesus macaque Fab RM19R | |
| 7LO6 | Q2N0S6 | Structure of CD4 mimetic BNM-III-170 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | |
| 6MU7 | Q2N0S6 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-818251 in Complex with Human Antibodies 3H109L and 35O22 at 3.1 Angstrom | |
| 6V8X | Q2N0S6 | VRC01 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | |
| 7LG6 | Q2N0S6 | BG505 SOSIP.v5.2 in complex with VRC40.01 and RM19R Fabs | |
| 8EUU | Q2N0S6 | Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01 FAB | |
| 8EUV | Q2N0S6 | Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-COMBO1 FAB | |
| 8EUW | Q2N0S6 | Cryo-EM structure of HIV-1 BG505 DS-SOSIP ENV trimer bound to VRC34.01-MM28 FAB | |
| 8TNG | Q2N0S6 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site | |
| 8TNH | Q2N0S6 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site | |
| 8TNI | Q2N0S6 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing bi-specific antibody CAP256L-R27 targeting the CD4-binding site and the V2-apex | |
| 4NCO | Q2N0S6 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 | |
| 4ZMJ | Q2N0S6 | Crystal Structure of Ligand-Free BG505 SOSIP.664 HIV-1 Env Trimer | |
| 5ACO | Q2N0S6 | Cryo-EM structure of PGT128 Fab in complex with BG505 SOSIP.664 Env trimer | |
| 5C7K | Q2N0S6 | Crystal structure BG505 SOSIP gp140 HIV-1 Env trimer bound to broadly neutralizing antibodies PGT128 and 8ANC195 | |
| 5CEZ | Q2N0S6 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with an early putative precursor of the PGT121 family at 3.0 Angstrom | |
| 5CJX | Q2N0S6 | Crystal structure of 8ANC195 Fab in complex with BG505 SOSIP.664 HIV-1 Env trimer | |
| 5D9Q | Q2N0S6 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46 | |
| 5FYL | Q2N0S6 | Crystal Structure at 3.7 A Resolution of Fully Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer in Complex with Broadly Neutralizing Antibodies PGT122 and 35O22 | |
| 5I8H | Q2N0S6 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer in Complex with V3 Loop-targeting Antibody PGT122 Fab and Fusion Peptide-targeting Antibody VRC34.01 Fab | |
| 6DE7 | Q2N0S6 | Crystal Structure at 4.3 A Resolution of Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer with Interdomain Stabilization 113C-429GCG in Complex with Broadly Neutralizing Antibodies PGT122 and 35O22 | |
| 6MAR | Q2N0S6 | HIV-1 Envelope Glycoprotein Clone BG505 delCT N332T in complex with broadly neutralizing antibody Fab PGT151 | |
| 6V8Z | Q2N0S6 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | |
| 6VN0 | Q2N0S6 | BG505 SOSIP.v4.1 in complex with rhesus macaque Fab RM20F | |
| 6W03 | Q2N0S6 | Crystal Structure of HIV-1 BG505 DS-SOSIP.3mut Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.3 Angstrom | |
| 7MXE | Q2N0S6 | Ab1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab | |
| 7TFN | Q2N0S6 | Cryo-EM structure of CD4bs antibody Ab1303 in complex with HIV-1 Env trimer BG505 SOSIP.664 | |
| 7TXD | Q2N0S6 | Cryo-EM structure of BG505 SOSIP HIV-1 Env trimer in complex with CD4 receptor (D1D2) and broadly neutralizing darpin bnD.9 | |
| 7UCF | Q2N0S6 | Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24 | |
| 8FIS | Q2N0S6 | Structure of Bispecific CAP256V2LS-J3 Fab in complex with BG505 DS-SOSIP.664 | |
| 8TTW | Q2N0S6 | Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074 | |
| 7MDT | Q2N0S6 | BG505 SOSIP.v5.2 in complex with the monoclonal antibody Rh4O9.8 (as Fab fragment) | |
| 7MDU | Q2N0S6 | BG505 SOSIP MD39 in complex with the monoclonal antibodies Rh.33104 mAb.1 and RM20A3 | |
| 7TFO | Q2N0S6 | Cryo-EM structure of HIV-1 Env trimer BG505 SOSIP.664 in complex with CD4bs antibody Ab1573 | |
| 8DP1 | Q2N0S6 | Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab | |
| 8VFV | Q2N0S6 | HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab | |
| 8TOX | Q2N0S6 | Cryo-EM structure of BG505 Env mutant A517E in complex with antibody ACS202 Fab | |
| 8FYJ | Q2N0S6 | Structure of HIV-1 BG505 SOSIP-HT2 in complex with two CD4 molecules (class I) |
